An R wrapper for SigProfilerExtractor that allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the number of operative mutational signatures, their activities in each sample, and the probability for each signature to cause a specific mutation type in a cancer sample. The tool makes use of SigProfilerMatrixGenerator and SigProfilerPlotting.
active 2023-09-21 → 2025-03-29 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 556 days from 2023-09-21 to 2025-03-29. Pushes: 1 total, peak 1 in a day. Pull requests: 4 total, peak 3 in a day. Issues: 4 total, peak 2 in a day. Comments: 6 total, peak 3 in a day. Stars: 4 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| mdbarnesUCSD | 9 | 1 | 3 | 3 |
| marcos-diazg | 2 | 0 | 0 | 1 |
| jrcodina | 2 | 0 | 0 | 1 |
| ab08028 | 2 | 0 | 0 | 1 |
| jingquanlim | 1 | 0 | 1 | 0 |
Recent activity
Latest issues, pull requests and releases
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 4 stars here means stars gained during the window, not the repo's star count.