SigProfilerMatrixGenerator creates mutational matrices for all types of somatic mutations. It allows downsizing the generated mutations only to parts for the genome (e.g., exome or a custom BED file). The tool seamlessly integrates with other SigProfiler tools.
active 2024-07-10 → 2025-12-20 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 529 days from 2024-07-10 to 2025-12-20. Pushes: 15 total, peak 2 in a day. Pull requests: 18 total, peak 4 in a day. Issues: 20 total, peak 1 in a day. Comments: 34 total, peak 2 in a day. Stars: 6 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| mdbarnesUCSD | 46 | 12 | 14 | 15 |
| azhark2 | 7 | 0 | 2 | 3 |
| burcakotlu | 6 | 0 | 0 | 4 |
| MousumyCSE | 4 | 3 | 1 | 0 |
| marianaurera | 3 | 0 | 0 | 1 |
| MeteorLiu96 | 3 | 0 | 0 | 1 |
| sainadfensi | 2 | 0 | 0 | 2 |
| lakshsesh97 | 2 | 0 | 0 | 1 |
| Angel030331 | 2 | 0 | 0 | 2 |
| antoniakowalewski | 1 | 0 | 0 | 1 |
| DarioS | 1 | 0 | 0 | 0 |
| edceeyuchen | 1 | 0 | 0 | 0 |
| nnordborg | 1 | 0 | 0 | 1 |
| josrpowe208 | 1 | 0 | 0 | 0 |
| YingYa | 1 | 0 | 0 | 0 |
| Xinwen1206 | 1 | 0 | 0 | 1 |
| lculibrk | 1 | 0 | 0 | 0 |
| GACGAMA | 1 | 0 | 0 | 1 |
| sfhart33 | 1 | 0 | 0 | 0 |
| QichenFU | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue#238azhark22025-11-04 00:01Incorrect Strand Interpretation in SVMatrixGenerator
- Issue comment#238azhark22025-11-04 00:01Incorrect Strand Interpretation in SVMatrixGenerator
- Pull request#239mdbarnesUCSD2025-10-28 21:07
- Issue comment#237mdbarnesUCSD2025-10-21 16:06Missing wiki
- Issue comment#235lakshsesh972025-10-08 12:20Error Processing Delly Structural Variants VCF file ("No objects to concatenate")
- Issue comment#235antoniakowalewski2025-10-03 04:56Error Processing Delly Structural Variants VCF file ("No objects to concatenate")
- Issue#235lakshsesh972025-09-01 14:33Error Processing Delly Structural Variants VCF file ("No objects to concatenate")
- Issue#234josrpowe2082025-08-13 22:58ICGC VCF v4.1 compatibility failure
- ReleasemdbarnesUCSD2025-08-05 22:25v1.3.5
- Pull request#233mdbarnesUCSD2025-08-05 22:20
- Pull request#233mdbarnesUCSD2025-08-05 21:50
- Pull request#232mdbarnesUCSD2025-08-05 21:49
- Pull request#231mdbarnesUCSD2025-08-05 20:51
- Issue comment#212QichenFU2025-07-09 04:42Custom genome
- Issue comment#211azhark22025-07-06 04:21Error when processing GRIDSS VCFs
- Pull request#231azhark22025-07-06 04:20
- Issue comment#211sainadfensi2025-07-01 22:42Error when processing GRIDSS VCFs
- Pull request#230mdbarnesUCSD2025-06-06 22:02
- Pull request#230mdbarnesUCSD2025-06-06 21:41
- Pull request#227mdbarnesUCSD2025-06-06 20:43
- Issue#226MeteorLiu962025-05-25 22:27SigProfilerMaxGenerator slience stalled
- Issue comment#226MeteorLiu962025-05-07 22:37SigProfilerMaxGenerator slience stalled
- Issue#226MeteorLiu962025-05-01 22:48SigProfilerMaxGenerator slience stalled
- Issue comment#225mdbarnesUCSD2025-04-30 22:34Visualization of variants from RNA seq
- Issue#225mdbarnesUCSD2025-04-30 22:34Visualization of variants from RNA seq
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 6 stars here means stars gained during the window, not the repo's star count.