AlphaImpute2: pedigree- and population-based genotype imputation
active 2023-10-09 → 2026-06-12 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 978 days from 2023-10-09 to 2026-06-12. Pushes: 16 total, peak 4 in a day. Pull requests: 16 total, peak 2 in a day. Issues: 23 total, peak 3 in a day. Comments: 47 total, peak 4 in a day. Stars: 2 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| gregorgorjanc | 54 | 11 | 6 | 28 |
| XingerTang | 35 | 5 | 4 | 12 |
| yqiqichen | 12 | 0 | 6 | 3 |
| AprilYUZhang | 2 | 0 | 0 | 1 |
| Sendong98 | 2 | 0 | 0 | 1 |
| david20011999 | 2 | 0 | 0 | 1 |
| jsleper | 1 | 0 | 0 | 0 |
| RosCraddock | 1 | 0 | 0 | 1 |
| sergiogonmoll | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#66XingerTang2026-06-09 00:09Add X chr functionality
- Issue comment#66AprilYUZhang2026-05-13 18:34Add X chr functionality
- Issue#62XingerTang2026-03-18 11:58Improve documentation and other minor updates
- Issue comment#61gregorgorjanc2025-12-23 07:57Replace A Whalen's email
- Issue comment#61gregorgorjanc2025-12-22 11:29Replace A Whalen's email
- Issue#60gregorgorjanc2025-12-19 08:58Report version via -version
- Issue comment#54gregorgorjanc2025-12-07 20:02Possble improvements in segregation outputs
- Issue comment#54XingerTang2025-12-04 16:42Possble improvements in segregation outputs
- Issue#51XingerTang2025-12-04 15:06Mismatch between haplotype output and genotype output
- Issue#53XingerTang2025-12-04 15:06Almost unusable sequence input
- Issue#52XingerTang2025-12-04 15:06Incorrect outputs of population imputation for very small sample input
- Pull request#56XingerTang2025-12-04 15:06
- Issue comment#54gregorgorjanc2025-12-04 11:35Possble improvements in segregation outputs
- Issue comment#56gregorgorjanc2025-12-04 11:34Release v0.0.3
- Issue comment#54gregorgorjanc2025-11-28 16:02Possble improvements in segregation outputs
- Issue#53XingerTang2025-11-27 11:34Almost unusable sequence input
- Issue comment#52gregorgorjanc2025-11-26 13:45Incorrect outputs of population imputation for very small sample input
- Issue comment#52gregorgorjanc2025-11-26 11:28Incorrect outputs of population imputation for very small sample input
- Issue comment#52gregorgorjanc2025-11-26 05:09Incorrect outputs of population imputation for very small sample input
- Issue comment#52XingerTang2025-11-25 16:20Incorrect outputs of population imputation for very small sample input
- Issue comment#51XingerTang2025-11-25 14:37Mismatch between haplotype output and genotype output
- Issue comment#51gregorgorjanc2025-11-25 14:00Mismatch between haplotype output and genotype output
- Issue#50XingerTang2025-11-13 16:21Add output option support
- Issue comment#27gregorgorjanc2025-11-13 03:09Are writekey and onlykeyed output options implemented?
- Issue#13XingerTang2025-11-12 22:58Simplify installation
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 2 stars here means stars gained during the window, not the repo's star count.