AlphaPart implements a method for partitioning genetic trends to quantify the sources of genetic gain in breeding programmes
active 2024-12-21 → 2026-02-09 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 416 days from 2024-12-21 to 2026-02-09. Pushes: 17 total, peak 7 in a day. Pull requests: 3 total, peak 1 in a day. Issues: 24 total, peak 15 in a day. Comments: 18 total, peak 4 in a day. Stars: 0 total, peak 0 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| gregorgorjanc | 53 | 15 | 2 | 12 |
| RosCraddock | 3 | 0 | 0 | 2 |
| janaobsteter | 2 | 0 | 1 | 1 |
| david20011999 | 2 | 0 | 0 | 2 |
| github-actions[bot] | 2 | 2 | 0 | 0 |
| alegarra | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#46RosCraddock2026-02-09 15:46Simple examples in Founders.rmd
- Issue comment#63gregorgorjanc2025-10-31 12:15Ibd partitioning
- Issue#62RosCraddock2025-10-31 12:10Create vignette on IBD/gametic partitioning
- Pull request#59janaobsteter2025-10-28 12:36
- Issue comment#55janaobsteter2025-10-28 12:25Fix GitHub action for R CMD check (on commit/PR)
- Issue#29gregorgorjanc2025-10-27 15:19Fix package check: checking for hidden files and directories ...
- Issue#3gregorgorjanc2025-10-27 14:12Rcpp code improvement
- Issue comment#10gregorgorjanc2025-10-27 11:32Document how we handle genetic groups in pedigree
- Issue comment#25gregorgorjanc2025-10-27 11:29Consolidate terminology
- Issue#25gregorgorjanc2025-10-27 11:13Consolidate terminology
- Issue comment#46gregorgorjanc2025-10-27 10:59Simple examples in Founders.rmd
- Issue comment#48gregorgorjanc2025-10-27 09:46Should I get T matrix out when I run AlphaPart with colBV = "one" and colPath = "IId"?
- Issue#45gregorgorjanc2025-10-25 07:31Cite Thiago's paper on plant breeding use case
- Issue#45gregorgorjanc2025-10-25 07:18Cite Thiago's paper on plant breeding use case
- Issue#44gregorgorjanc2025-10-25 07:16Cite Ros's paper on partitioning with IBD information
- Issue#35gregorgorjanc2025-10-25 07:16Create vignette that shows how to deal with genotypes
- Issue#43gregorgorjanc2025-10-25 07:16Cite Jana's & Thiago's paper on partitioning with genomic information
- Issue#42gregorgorjanc2025-10-25 07:16Cite Ros' paper on partitioning with non-zero mean in founders and metafounders
- Issue#18gregorgorjanc2025-10-25 07:16Implement gametic/IBD/phased-based partitioning
- Issue#34gregorgorjanc2025-10-25 07:16Create vignette that shows how to deal with GV samples
- Issue#7gregorgorjanc2025-10-25 07:16Double check AlphaPart and genetic groups
- Issue#44gregorgorjanc2025-10-25 07:03Cite Ros's paper on partitioning with IBD information
- Issue#42gregorgorjanc2025-10-25 07:02Cite Ros' paper on partitioning with non-zero mean in founders and metafounders
- Issue#40gregorgorjanc2025-10-25 06:33Remove RColorBrewer and move to ggplot2 system?
- Issue#39gregorgorjanc2025-10-25 06:32Remove directlabels and move to ggplot2 system?
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.