A scalable high-throughput metabolic and biogeochemical functional trait profiler
active 2023-08-29 → 2026-03-24 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 939 days from 2023-08-29 to 2026-03-24. Pushes: 3 total, peak 1 in a day. Pull requests: 3 total, peak 3 in a day. Issues: 65 total, peak 4 in a day. Comments: 68 total, peak 5 in a day. Stars: 77 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| patriciatran | 26 | 2 | 0 | 14 |
| LvbBo | 7 | 0 | 0 | 4 |
| lacy111693 | 7 | 0 | 0 | 6 |
| HAIS-st | 7 | 0 | 0 | 3 |
| hyShen-hzau | 6 | 0 | 0 | 3 |
| ZhengXiaoxuan11542 | 4 | 0 | 0 | 3 |
| Burgersnow | 3 | 0 | 0 | 2 |
| xjhzjucas | 3 | 0 | 0 | 1 |
| Christaline-George | 3 | 0 | 0 | 1 |
| snpone | 3 | 0 | 0 | 3 |
| susheelbhanu | 3 | 0 | 0 | 2 |
| Calvin2077 | 3 | 0 | 0 | 2 |
| diogoburgos | 3 | 0 | 0 | 1 |
| ChaoLab | 3 | 1 | 0 | 2 |
| PandengWang | 3 | 0 | 3 | 0 |
| Drob84761 | 2 | 0 | 0 | 1 |
| laibinhuang | 2 | 0 | 0 | 1 |
| pou2025 | 2 | 0 | 0 | 0 |
| Sharifah89 | 2 | 0 | 0 | 1 |
| LiZhihua1982 | 2 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#222mayurkedare-bio2026-02-05 05:17Can't download files dbCAN-fam-HMMs.txt - Resolving bcb.unl.edu (bcb.unl.edu)... failed: Name or service not known.
- Issue comment#223Haolius2026-01-10 08:17Problems with the full installation
- Issue comment#220lacy1116932025-11-10 21:57Ethanol oxidation present in MW-score but missing from draw carbon cycle figures
- Issue comment#25lacy1116932025-10-06 17:31Discrepancy between HMMhits and KEGGModuleStepHit (metabolic version 4.0)
- Issue comment#213Cczyf2025-10-03 04:22mv: cannot stat '/mnt/e/DA/shallow_shotgun/function_annotation_2nd_test/Output_energy_flow/Energy_plot/network.plot.pdf': No such file or directory
- Issue#218susheelbhanu2025-08-25 06:56Restart or rerun
- Issue comment#188YuWang072025-08-22 03:04metatranscriptomic errors
- Issue#219anxious-astrobiologist2025-08-13 22:12Understanding completeness results in METABOLIC_result.xlsx file.
- Issue comment#218susheelbhanu2025-08-11 14:10Restart or rerun
- Issue comment#196susheelbhanu2025-07-17 11:20Hello，install problem
- Issue#214isuvodeep2025-07-03 18:55error - readline() on closed filehandle IN at /share/pkg.7/metabolic/4.0/install//METABOLIC/METABOLIC-G.pl line 1147.
- Issue#212green345672025-06-03 06:40error when run “perl METABOLIC-C.pl -test true”
- Issue comment#207Christaline-George2025-05-28 00:01readline() on closed filehandle _IN at METABOLIC-C.pl line 1909.
- Issue#211pou20252025-05-17 00:57Error while trying to run metaboLIc in server hpc
- Issue#210pou20252025-05-14 10:44perl error while running metabolic
- Issue comment#208zhenzhen04212025-05-13 07:40Issue with mapping in METABOLIC-C
- Issue#209Ryan-OCEA2025-05-09 14:54METABOLIC_Figures clean up
- Issue comment#207lacy1116932025-05-06 18:29readline() on closed filehandle _IN at METABOLIC-C.pl line 1909.
- Issue#208zackhenny2025-02-21 02:13Issue with mapping in METABOLIC-C
- Issue comment#190zackhenny2025-02-19 13:29When running metabolic-c, I get the following error:
- Issue comment#202lacy1116932025-02-18 19:38Metabolic-c test files stuck at Prodigal
- Issue#207Christaline-George2025-02-13 08:11readline() on closed filehandle _IN at METABOLIC-C.pl line 1909.
- Issue comment#202patriciatran2025-02-07 23:18Metabolic-c test files stuck at Prodigal
- Issue comment#202lacy1116932025-02-07 19:51Metabolic-c test files stuck at Prodigal
- Issue comment#194patriciatran2025-01-27 21:56Disable hard-coded cpu count for test
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 77 stars here means stars gained during the window, not the repo's star count.