A wrapper to identify, bin, classify, and predict host-viral relationship for viruses, we will edit it based on real needs.
active 2023-12-09 → 2026-05-16 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 890 days from 2023-12-09 to 2026-05-16. Pushes: 16 total, peak 2 in a day. Pull requests: 1 total, peak 1 in a day. Issues: 35 total, peak 8 in a day. Comments: 54 total, peak 8 in a day. Stars: 24 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| ChaoLab | 32 | 16 | 0 | 8 |
| Cczyf | 9 | 0 | 0 | 6 |
| BigtigerLi | 5 | 0 | 0 | 2 |
| yyyangzd | 5 | 0 | 0 | 4 |
| Rap0ss0 | 5 | 0 | 0 | 4 |
| kangluyao | 3 | 0 | 0 | 3 |
| brilliant2643 | 3 | 0 | 0 | 3 |
| qazwsx1995 | 3 | 0 | 0 | 0 |
| ewars | 3 | 0 | 0 | 2 |
| weipengLLL | 3 | 0 | 0 | 2 |
| try-hunter | 2 | 0 | 0 | 1 |
| XinyuGuokk | 2 | 0 | 0 | 2 |
| SaraOliva | 2 | 0 | 0 | 0 |
| ChiLiubio | 2 | 0 | 0 | 0 |
| Zoeyk9 | 2 | 0 | 0 | 2 |
| seanyao97 | 2 | 0 | 0 | 2 |
| tynot | 2 | 0 | 0 | 2 |
| Kkoujin | 2 | 0 | 0 | 1 |
| drob2727 | 2 | 0 | 0 | 0 |
| acvill | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#64weipengLLL2025-09-13 09:59BUG when using the custom MAGs
- Issue comment#37weipengLLL2025-09-13 09:44FileNotFoundError: [Errno 2] No such file or directory: 'Host_prediction_to_genome_m90.csv'
- Issue#66acvill2025-08-27 18:33interpreting abundance output
- Issue#65weipengLLL2025-08-18 01:55error in Viwrap set_up_env and download
- Issue comment#57Cczyf2025-08-15 03:13Issure about Step 3 Set up the other conda
- Issue comment#26kangluyao2025-08-15 02:13FileNotFoundError: [Errno 2] No such file or directory: '/data4/machuang/test1/ViWrap_outdir/00_VIBRANT_test_metaG/VIBRANT_phages_test_metaG/test_metaG.phages_lytic.fna'
- Issue comment#57kangluyao2025-08-14 11:23Issure about Step 3 Set up the other conda
- Issue comment#37XinyuGuokk2025-08-13 07:25FileNotFoundError: [Errno 2] No such file or directory: 'Host_prediction_to_genome_m90.csv'
- Issue comment#37XinyuGuokk2025-08-13 07:23FileNotFoundError: [Errno 2] No such file or directory: 'Host_prediction_to_genome_m90.csv'
- Issue#63Rap0ss02025-07-24 11:46genome_by_genome.csv is missing!
- Issue comment#53Kkoujin2025-07-22 06:56Problems analyzing multiple samples
- Issue comment#53Cczyf2025-07-19 04:11Problems analyzing multiple samples
- Issue comment#59kangluyao2025-07-12 09:32FileNotFoundError: [Errno 2] No such file or directory: 'test_metaG_ViWrap_out/00_VIBRANT_VirSorter_test_metaG/VirSorter_test_metaG/pass/final-viral-score.tsv'
- Pull request#62biociao2025-07-08 05:24
- Issue comment#59yyyangzd2025-04-17 03:37FileNotFoundError: [Errno 2] No such file or directory: 'test_metaG_ViWrap_out/00_VIBRANT_VirSorter_test_metaG/VirSorter_test_metaG/pass/final-viral-score.tsv'
- Issue comment#59yyyangzd2025-04-16 04:52FileNotFoundError: [Errno 2] No such file or directory: 'test_metaG_ViWrap_out/00_VIBRANT_VirSorter_test_metaG/VirSorter_test_metaG/pass/final-viral-score.tsv'
- Issue comment#57yyyangzd2025-04-16 04:51Issure about Step 3 Set up the other conda
- Issue comment#60try-hunter2025-04-13 10:45ViWrap hangs on iPHoP step
- Issue comment#52brilliant26432025-04-09 03:53VS2 issue
- Issue comment#57brilliant26432025-04-09 03:48Issure about Step 3 Set up the other conda
- Issue comment#28brilliant26432025-04-09 03:44Databases manually setup & Virus identification tools
- Issue#61try-hunter2025-03-16 07:39Can ViWrap resume running from a breakpoint
- Issue comment#56Cczyf2024-12-25 07:01FileNotFoundError: [Errno 2] No such file or directory: 'ViWrap_test/ViWrap_output/02_vRhyme_outdir/vRhyme_best_bins_fasta_CheckV_result/CheckV_quality_summary.txt'
- Issue#58Cczyf2024-12-25 02:12FileNotFoundError: [Errno 2] No such file or directory: 'test_metaG_ViWrap_out/00_VIBRANT_VirSorter_test_metaG/VirSorter_test_metaG/CheckV_result/quality_summary.tsv'
- Issue#57Cczyf2024-12-25 01:47Issure about Step 3 Set up the other conda
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 24 stars here means stars gained during the window, not the repo's star count.