A user-friendly workflow for phylogenomics
active 2024-10-10 → 2026-08-10 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 670 days from 2024-10-10 to 2026-08-10. Pushes: 44 total, peak 6 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 6 total, peak 1 in a day. Comments: 11 total, peak 4 in a day. Stars: 10 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| AstrobioMike | 52 | 44 | 0 | 6 |
| raufs | 2 | 0 | 0 | 2 |
| DanielleMStevens | 1 | 0 | 0 | 1 |
| Artifice120 | 1 | 0 | 0 | 1 |
| Stian-2rz | 1 | 0 | 0 | 0 |
| chtsai0105 | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#104AstrobioMike2025-10-29 15:11gtt-gen-SCG-HMMs: Downloading the PFam HMM information file failed
- Issue#110liuxy10252025-07-22 01:01GToTree processes only part of input genomes, then silently skips remaining genomes during "Working on the genomes provided as fasta files" step
- Issue comment#110AstrobioMike2025-07-18 12:24GToTree processes only part of input genomes, then silently skips remaining genomes during "Working on the genomes provided as fasta files" step
- Issue#110liuxy10252025-07-18 09:37GToTree processes only part of input genomes, then silently skips remaining genomes during "Working on the genomes provided as fasta files" step
- ReleaseAstrobioMike2025-07-09 21:28GToTree v1.8.16
- Issue#109chtsai01052025-07-03 17:59Inference on nucleotide fasta got no hit at all
- Issue#108AstrobioMike2025-06-27 14:45IQtree2 doesn't accept GTotree's partitions if a specific model is called
- ReleaseAstrobioMike2025-06-27 14:25v1.8.15
- Issue comment#106AstrobioMike2025-06-26 19:10Using GToTree for organism identification
- Issue comment#107AstrobioMike2025-06-18 20:47SSL Certificate Verification Fails When Accessing GTDB URL and a workaround using mirror
- Issue#107Stian-2rz2025-06-18 13:50SSL Certificate Verification Fails When Accessing GTDB URL and a workaround using mirror
- Issue comment#106AstrobioMike2025-06-12 20:29Using GToTree for organism identification
- Issue comment#106Artifice1202025-06-12 19:46Using GToTree for organism identification
- Issue comment#98raufs2025-03-26 01:56Universal ToL and Eukaryotes
- Issue comment#89AstrobioMike2025-03-26 01:25file name spacing issue with gtt-get-accessions-from-gtdb
- Issue comment#98AstrobioMike2025-03-26 01:20Universal ToL and Eukaryotes
- Issue comment#98raufs2025-03-26 00:12Universal ToL and Eukaryotes
- Issue comment#105AstrobioMike2025-03-22 00:25iqtree2
- Issue comment#101DanielleMStevens2025-01-24 21:05Alignments complete with only x's
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 10 stars here means stars gained during the window, not the repo's star count.