Improving gene isoform quantification with miniQuant
active 2024-01-13 → 2026-02-25 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 775 days from 2024-01-13 to 2026-02-25. Pushes: 9 total, peak 2 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 14 total, peak 3 in a day. Comments: 15 total, peak 3 in a day. Stars: 18 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| Tidesun | 25 | 9 | 0 | 9 |
| Youpu-Chen | 2 | 0 | 0 | 0 |
| lonsbio | 1 | 0 | 0 | 0 |
| qiuyixmm | 1 | 0 | 0 | 1 |
| Bridream | 1 | 0 | 0 | 0 |
| jjlxJUn | 1 | 0 | 0 | 0 |
| xhuashen | 1 | 0 | 0 | 0 |
| mjsteinbaugh | 1 | 0 | 0 | 1 |
| jyguo2004 | 1 | 0 | 0 | 0 |
| lorenzopanca5 | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#13lorenzopanca52026-02-11 17:12Multiple inputs in read fields running hybrid mode
- Issue#12jyguo20042025-12-31 02:50Request for Guidance on Long-Read Input Preparation for miniQuant
- Issue comment#12Tidesun2025-12-30 18:55Request for Guidance on Long-Read Input Preparation for miniQuant
- Issue#10Tidesun2025-09-29 17:51Request for a Singularity image of the latest miniQuant release
- Issue comment#10qiuyixmm2025-09-29 07:57Request for a Singularity image of the latest miniQuant release
- Issue comment#10Tidesun2025-09-29 04:37Request for a Singularity image of the latest miniQuant release
- Issue comment#8Tidesun2025-09-15 20:12Older version v1.1 in docker image
- Issue#8Tidesun2025-09-15 20:12Older version v1.1 in docker image
- Issue comment#9Tidesun2025-09-15 19:48Expected_num_short_read_pairs and effective_length
- Issue#9Tidesun2025-09-15 19:48Expected_num_short_read_pairs and effective_length
- ReleaseTidesun2025-09-15 19:45miniQuant-v1.4.1
- Issue#8Bridream2025-09-15 09:25Older version v1.1 in docker image
- Issue#4Tidesun2025-08-12 18:09Question about transcriptome quantification in long read-based gene annotation
- Issue#4Tidesun2025-08-01 19:02Question about transcriptome quantification in long read-based gene annotation
- ReleaseTidesun2025-07-30 07:50miniQuant-v1.4
- Issue comment#7Tidesun2025-07-30 03:42running time and the memory usage
- Issue comment#7xhuashen2025-07-23 04:04running time and the memory usage
- Issue comment#7xhuashen2025-07-23 03:00running time and the memory usage
- Issue comment#7Tidesun2025-07-22 17:55running time and the memory usage
- Issue#5Tidesun2025-07-04 20:28any conda container available, or other avenue to run the tools
- Issue comment#5Tidesun2025-07-03 22:28any conda container available, or other avenue to run the tools
- Issue#6Tidesun2025-07-03 20:07Error with thread 'km_comp' panicked
- ReleaseTidesun2025-07-03 20:07miniQuant-v1.2.2
- Issue comment#6Tidesun2025-07-03 19:48Error with thread 'km_comp' panicked
- Issue comment#6Tidesun2025-07-03 17:52Error with thread 'km_comp' panicked
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 18 stars here means stars gained during the window, not the repo's star count.