Generates basic quality control statistics on Illumina fastq sequence files. Forked originally from the BCCDC.
active 2023-08-30 → 2025-08-29 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 731 days from 2023-08-30 to 2025-08-29. Pushes: 31 total, peak 9 in a day. Pull requests: 19 total, peak 5 in a day. Issues: 23 total, peak 8 in a day. Comments: 2 total, peak 1 in a day. Stars: 0 total, peak 0 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| dfornika | 36 | 15 | 7 | 1 |
| JamesZlosnik | 4 | 1 | 1 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue#31dfornika2025-07-22 23:22Support alternative hostile index dir
- Pull request#32dfornika2025-07-22 23:22
- Pull request#32dfornika2025-07-22 22:49
- Issue#31dfornika2025-07-22 22:49Support alternative hostile index dir
- Issue#26dfornika2025-07-22 21:38Upgrade `hostile`
- Issue#28dfornika2025-07-22 21:35Upgrade `fastp`
- Issue#25dfornika2025-07-22 21:35Use separate container for dehosting when using `docker` profile
- Pull request#30dfornika2025-07-22 21:35
- Issue#27dfornika2025-07-22 21:12Collect `duplication_rate` metric
- Pull request#29dfornika2025-07-22 21:12
- Pull request#29dfornika2025-07-22 20:59
- Issue#28dfornika2025-07-22 20:58Upgrade `fastp`
- Issue#27dfornika2025-07-22 20:06Collect `duplication_rate` metric
- Pull request#24dfornika2025-07-21 19:32
- Issue#21dfornika2025-07-18 23:03Update `fastp` and use `--trim_poly_g`
- Pull request#22dfornika2025-07-18 23:03
- Issue#21dfornika2025-07-18 22:24Update `fastp` and use `--trim_poly_g`
- Issue#19dfornika2025-07-18 20:44Add apptainer and docker profiles
- Pull request#20dfornika2025-07-18 20:44
- Pull request#20dfornika2025-07-18 19:13
- Pull request#18dfornika2025-07-18 18:44
- Pull request#17dfornika2025-07-18 16:51
- Releasedfornika2024-12-18 00:12v0.3.1
- Issue#14dfornika2024-12-17 23:44Remove defaults channel
- Pull request#15dfornika2024-12-17 23:44
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.