The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.
active 2023-08-18 → 2026-01-29 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 896 days from 2023-08-18 to 2026-01-29. Pushes: 22 total, peak 2 in a day. Pull requests: 1 total, peak 1 in a day. Issues: 54 total, peak 4 in a day. Comments: 71 total, peak 6 in a day. Stars: 5 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| mikekucera | 74 | 22 | 0 | 25 |
| risserlin | 31 | 0 | 0 | 21 |
| veroniquevoisin | 17 | 0 | 0 | 11 |
| amkhasawneh | 5 | 0 | 0 | 3 |
| sarneg | 4 | 0 | 0 | 2 |
| AlexanderPico | 4 | 0 | 1 | 1 |
| gharsallitarek | 2 | 0 | 0 | 2 |
| freakytam | 2 | 0 | 0 | 1 |
| SchwarzLena | 2 | 0 | 0 | 1 |
| LilliThePink | 2 | 0 | 0 | 1 |
| TarekGharsalli | 2 | 0 | 0 | 1 |
| yj2024 | 1 | 0 | 0 | 1 |
| nmaun053 | 1 | 0 | 0 | 0 |
| maciej-jonczyk | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#558risserlin2026-01-29 23:30can't save session after creating a subnetwork
- Issue comment#557risserlin2026-01-29 13:33EnrichmentMap - Cannot parse line 2 of enrichment file
- Issue#557nmaun0532025-12-12 20:21EnrichmentMap - Cannot parse line 2 of enrichment file
- Issue#556risserlin2025-06-11 19:03Filter network by GO class
- Issue comment#556maciej-jonczyk2025-06-11 18:29Filter network by GO class
- Issue comment#555gharsallitarek2024-12-10 14:02Combine enrichmentMap plot and network plot
- Issue comment#555risserlin2024-12-10 13:30Combine enrichmentMap plot and network plot
- Issue comment#554risserlin2024-11-21 16:30Building Enrichment Map error
- Issue comment#554risserlin2024-11-20 17:31Building Enrichment Map error
- Issue comment#554TarekGharsalli2024-11-20 17:25Building Enrichment Map error
- Issue comment#554gharsallitarek2024-11-14 12:31Building Enrichment Map error
- Issue#554TarekGharsalli2024-11-11 11:50Building Enrichment Map error
- Issue comment#553risserlin2024-10-11 14:07Building enrichmentmap error message : could not parse line 2 of the enrichment file!
- Issue comment#553freakytam2024-10-10 20:51Building enrichmentmap error message : could not parse line 2 of the enrichment file!
- Issue comment#553risserlin2024-10-10 13:53Building enrichmentmap error message : could not parse line 2 of the enrichment file!
- Issue comment#551LilliThePink2024-10-10 07:39Merge Tool to visualise communalities between two networks
- Issue#553freakytam2024-10-09 21:42Building enrichmentmap error message : could not parse line 2 of the enrichment file!
- Issue#552risserlin2024-10-08 14:38concentric circle visualization - ability to visualize multiple EM metrics in the same node
- Releasemikekucera2024-10-07 17:30EnrichmentMap 3.5.0
- Issue comment#551risserlin2024-09-17 12:51Merge Tool to visualise communalities between two networks
- Issue#551LilliThePink2024-09-17 09:25Merge Tool to visualise communalities between two networks
- Issue#512mikekucera2024-09-16 13:26EM unable to parse directories as before in Cytoscape Beta2 3.10
- Issue#526mikekucera2024-09-16 13:26filtering GSEA results by NES assumes positives are in one file and negatives are in another
- Issue#541mikekucera2024-08-29 20:15Input files for EnrichmentMap
- Issue#550mikekucera2024-08-29 19:38class file not working in latest EM
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 5 stars here means stars gained during the window, not the repo's star count.