Inference of RNA velocity modules for prediction of cell fates and integration with spatial and regulatory models.
active 2023-08-15 → 2026-02-06 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 907 days from 2023-08-15 to 2026-02-06. Pushes: 39 total, peak 11 in a day. Pull requests: 14 total, peak 4 in a day. Issues: 44 total, peak 9 in a day. Comments: 43 total, peak 7 in a day. Stars: 63 total, peak 5 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| AlexanderAivazidis | 82 | 39 | 7 | 20 |
| sezginerr | 9 | 0 | 7 | 2 |
| whyqian000 | 8 | 0 | 0 | 0 |
| Larrycpan | 6 | 0 | 0 | 3 |
| Stfort52 | 4 | 0 | 0 | 2 |
| jpark27 | 4 | 0 | 0 | 2 |
| JiehoonKwak | 4 | 0 | 0 | 2 |
| YSYL-FSH | 2 | 0 | 0 | 1 |
| cenk-celik | 2 | 0 | 0 | 1 |
| majeex233 | 2 | 0 | 0 | 1 |
| SevenTea7 | 2 | 0 | 0 | 1 |
| Windaswill | 1 | 0 | 0 | 1 |
| codecov[bot] | 1 | 0 | 0 | 1 |
| xbw445491720 | 1 | 0 | 0 | 0 |
| dajunlee | 1 | 0 | 0 | 1 |
| nynkekatinka | 1 | 0 | 0 | 0 |
| lcw-12323 | 1 | 0 | 0 | 1 |
| WT215 | 1 | 0 | 0 | 0 |
| bigmoore | 1 | 0 | 0 | 0 |
| JensBager | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#34Anna-E-F2026-02-06 09:04ERROR: No matching distribution found for jaxlib==0.4.10
- Issue#38nynkekatinka2025-08-25 19:36Cannot install Cell2Fate due to JAX dependency issues
- Issue comment#25dajunlee2025-08-11 06:06How to save and load cell2fate models?
- Issue comment#37AlexanderAivazidis2025-06-17 07:30When running adata = mod.export_posterior(adata), the memory usage suddenly spikes to over 94%, and then Ubuntu crashes directly.
- Issue#37AlexanderAivazidis2025-06-17 07:30When running adata = mod.export_posterior(adata), the memory usage suddenly spikes to over 94%, and then Ubuntu crashes directly.
- Issue#37bigmoore2025-06-07 14:48When running adata = mod.export_posterior(adata), the memory usage suddenly spikes to over 94%, and then Ubuntu crashes directly.
- Issue#26AlexanderAivazidis2025-06-05 09:14Cannot generate velocity stream plots
- Issue comment#36Yiikea2025-05-30 07:41"mod.train()" found invalid values
- Issue#36SevenTea72025-05-10 00:33"mod.train()" found invalid values
- Issue comment#4SevenTea72025-05-10 00:28Input data specifications?
- Issue comment#34Windaswill2025-05-07 03:03ERROR: No matching distribution found for jaxlib==0.4.10
- Issue comment#34YSYL-FSH2025-05-06 09:53ERROR: No matching distribution found for jaxlib==0.4.10
- Issue#34YSYL-FSH2025-05-06 09:53ERROR: No matching distribution found for jaxlib==0.4.10
- Issue comment#12lcw-123232025-03-27 01:57Problems with jax in mac & windows
- Issue comment#24AlexanderAivazidis2025-03-26 13:13Model training on multiple GPUs failed
- Issue#33AlexanderAivazidis2025-03-26 13:10Cannot generate velocity stream plots
- Issue#31AlexanderAivazidis2025-03-26 13:10Cannot generate velocity stream plots
- Issue comment#31AlexanderAivazidis2025-03-26 13:10Cannot generate velocity stream plots
- Issue comment#30AlexanderAivazidis2025-03-26 13:10Cannot generate velocity stream plots
- Issue#30AlexanderAivazidis2025-03-26 13:10Cannot generate velocity stream plots
- Issue comment#29AlexanderAivazidis2025-03-26 13:10Cannot generate velocity stream plots
- Issue#29AlexanderAivazidis2025-03-26 13:10Cannot generate velocity stream plots
- Issue comment#28AlexanderAivazidis2025-03-26 13:10Cannot generate velocity stream plots
- Issue#28AlexanderAivazidis2025-03-26 13:10Cannot generate velocity stream plots
- Issue comment#27AlexanderAivazidis2025-03-26 13:10Cannot generate velocity stream plots
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 63 stars here means stars gained during the window, not the repo's star count.