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Flexible and Learnable Cell Simulator

active 2023-10-302026-01-04 (UTC)

Complete coverage26,370 / 26,370 hourly files (100%) · 2 absent upstream2023-08-152026-08-17 (UTC)
Events
45
Pushes
7
Pull requests
7
Issues
11
Stars
11
Forks
0

Activity over time

Daily event counts in the loaded window

Line chart, 798 days from 2023-10-30 to 2026-01-04. Pushes: 7 total, peak 2 in a day. Pull requests: 7 total, peak 3 in a day. Issues: 11 total, peak 10 in a day. Comments: 0 total, peak 0 in a day. Stars: 11 total, peak 2 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
Bertinus24770
YannMauge1000

Recent activity

Latest issues, pull requests and releases

  • Issue#55YannMauge2025-06-24 12:59
    No path in compute cell knn paths
  • Pull request#54Bertinus2025-02-26 16:25
  • Pull request#54Bertinus2025-02-26 16:25
  • Pull request#53Bertinus2023-11-03 11:09
  • Pull request#53Bertinus2023-11-03 11:09
  • Issue#21Bertinus2023-10-30 13:10
    Write scripts to download the external datasets automatically
  • Issue#11Bertinus2023-10-30 13:10
    Add TF motif information from CIS-BP
  • Issue#24Bertinus2023-10-30 13:10
    Write documentation
  • Issue#26Bertinus2023-10-30 13:09
    test for `get_edges` and `interventions` -- watch for side effects or reallocation of memory.
  • Issue#37Bertinus2023-10-30 13:09
    Figure out how we can integrate ATAC-seq
  • Issue#41Bertinus2023-10-30 13:09
    Save / Load CellPop objects
  • Issue#36Bertinus2023-10-30 13:09
    Add a virus perturbation
  • Issue#29Bertinus2023-10-30 13:08
    Build an antisense oligo intervention, as well as a drug intervention
  • Issue#45Bertinus2023-10-30 13:07
    Have an interface with Scanpy (return adata objects)
  • Issue#49Bertinus2023-10-30 13:07
    Review how other simulators have been validated
  • Pull request#52Bertinus2023-10-30 12:21
  • Pull request#52Bertinus2023-10-30 12:12
  • Pull request#51Bertinus2023-10-30 12:11

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 11 stars here means stars gained during the window, not the repo's star count.