Tools to forge BSgenome data packages
active 2023-09-13 → 2025-12-31 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 841 days from 2023-09-13 to 2025-12-31. Pushes: 33 total, peak 4 in a day. Pull requests: 3 total, peak 1 in a day. Issues: 23 total, peak 3 in a day. Comments: 64 total, peak 19 in a day. Stars: 1 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| hpages | 71 | 31 | 1 | 34 |
| barracuda156 | 10 | 0 | 0 | 9 |
| JirkaMP | 5 | 0 | 0 | 2 |
| scjia-9165 | 5 | 0 | 0 | 5 |
| junjunxy | 4 | 0 | 0 | 2 |
| sadikmz | 4 | 0 | 0 | 2 |
| JaykishanJ | 4 | 0 | 0 | 3 |
| ifanirene | 4 | 0 | 0 | 2 |
| vjcitn | 3 | 0 | 0 | 3 |
| vmurigneu | 3 | 0 | 0 | 1 |
| LiNk-NY | 2 | 2 | 0 | 0 |
| francisco-franco-86 | 2 | 0 | 0 | 1 |
| gonzad66 | 1 | 0 | 0 | 0 |
| jeroen | 1 | 0 | 1 | 0 |
| zhang-shilong | 1 | 0 | 1 | 0 |
| joegeorgeson | 1 | 0 | 0 | 0 |
| ckuanglim85 | 1 | 0 | 0 | 0 |
| xiangyupan | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#52hpages2025-12-31 22:38Error: Writing all sequences to './BSgenome.Panubis.NCBI.Panubis1.0/inst/extdata/single_sequences.2bit' ... Error in .TwoBits_export(mapply(.DNAString_to_twoBit, object, seqnames), : UCSC library operation failed
- Issue comment#50francisco-franco-862025-11-14 19:03Create genome pkg for Lotus japonicus from NCBI
- Issue comment#50hpages2025-11-03 06:32Create genome pkg for Lotus japonicus from NCBI
- Issue#50francisco-franco-862025-11-02 06:01Create genome pkg for Lotus japonicus from NCBI
- Issue comment#48hpages2025-09-26 18:11BSgenomeForge] Difficulty creating a BSgenome package for a known species with a custom assembly
- Issue comment#48scjia-91652025-09-26 02:32BSgenomeForge] Difficulty creating a BSgenome package for a known species with a custom assembly
- Issue comment#48scjia-91652025-09-24 18:28BSgenomeForge] Difficulty creating a BSgenome package for a known species with a custom assembly
- Issue comment#48scjia-91652025-09-24 18:02BSgenomeForge] Difficulty creating a BSgenome package for a known species with a custom assembly
- Issue comment#48hpages2025-09-23 15:17BSgenomeForge] Difficulty creating a BSgenome package for a known species with a custom assembly
- Issue comment#48scjia-91652025-09-23 14:19BSgenomeForge] Difficulty creating a BSgenome package for a known species with a custom assembly
- Issue comment#48scjia-91652025-09-23 08:51BSgenomeForge] Difficulty creating a BSgenome package for a known species with a custom assembly
- Issue comment#49hpages2025-09-23 01:54error in .copyTwobitFile(seqfile_name, seqs_srcdir, seqs_destdir, verbose = verbose) : FAILED
- Issue#49xiangyupan2025-09-23 01:52error in .copyTwobitFile(seqfile_name, seqs_srcdir, seqs_destdir, verbose = verbose) : FAILED
- Issue#47hpages2025-09-23 00:31Invalid cross-device link
- Issue comment#47hpages2025-09-23 00:31Invalid cross-device link
- Issue comment#48hpages2025-09-23 00:11BSgenomeForge] Difficulty creating a BSgenome package for a known species with a custom assembly
- Issue#47gonzad662025-09-12 10:36Invalid cross-device link
- Issue comment#46hpages2025-08-29 06:23Update forgeBSgenomeDataPkgFromTwobitFile.R
- Issue comment#46hpages2025-08-28 23:58Update forgeBSgenomeDataPkgFromTwobitFile.R
- Pull request#46zhang-shilong2025-08-28 16:54
- Issue#44hpages2025-04-14 17:50Create new custom genome for BSgenome
- Issue comment#45hpages2025-04-11 05:54Create BSgenome from complicated genome
- Issue#45joegeorgeson2025-03-27 23:42Create BSgenome from complicated genome
- Issue comment#44hpages2024-11-11 16:22Create new custom genome for BSgenome
- Issue#44ckuanglim852024-08-13 10:07Create new custom genome for BSgenome
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 1 stars here means stars gained during the window, not the repo's star count.