Efficient manipulation of biological strings
active 2023-09-29 → 2026-07-04 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1010 days from 2023-09-29 to 2026-07-04. Pushes: 65 total, peak 6 in a day. Pull requests: 20 total, peak 4 in a day. Issues: 42 total, peak 6 in a day. Comments: 144 total, peak 25 in a day. Stars: 23 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| hpages | 110 | 54 | 4 | 37 |
| ahl27 | 82 | 9 | 14 | 44 |
| gevro | 34 | 0 | 0 | 30 |
| vjcitn | 10 | 0 | 0 | 10 |
| FelixErnst | 7 | 0 | 2 | 5 |
| LafontRapnouilTristan | 4 | 0 | 0 | 4 |
| LiNk-NY | 4 | 2 | 0 | 2 |
| yls2g13 | 3 | 0 | 0 | 1 |
| jeroen | 2 | 0 | 0 | 2 |
| hjarnek | 2 | 0 | 0 | 1 |
| apcristi | 2 | 0 | 0 | 1 |
| karlestira | 1 | 0 | 0 | 1 |
| susheelbhanu | 1 | 0 | 0 | 1 |
| evaegelyng | 1 | 0 | 0 | 1 |
| BlueDrink9 | 1 | 0 | 0 | 0 |
| tomsing1 | 1 | 0 | 0 | 0 |
| peteryzheng | 1 | 0 | 0 | 0 |
| almeidasilvaf | 1 | 0 | 0 | 0 |
| LTLA | 1 | 0 | 0 | 0 |
| twmccart | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Pull request#136ahl272026-02-03 22:25
- Issue#135ahl272026-01-16 01:47Improve error message for `subseq` when called on a vector
- Issue#133hpages2026-01-06 22:01"DotBracket" seqtype missing from compatible seqtypes starting with 2.79.2
- Pull request#134FelixErnst2026-01-06 18:38
- Pull request#134FelixErnst2025-12-26 13:01
- Issue comment#130hpages2025-11-04 20:06fix: XString comparison operators
- Pull request#130ahl272025-08-18 16:49
- Issue#129almeidasilvaf2025-08-07 08:49Size of DNAStringSet object not compatible with `nchar()`
- Issue#128tomsing12025-08-05 05:24Support for indels in vmatchPattern for XStringSets
- Issue comment#124hpages2025-05-07 01:27Fix: minor bug with input verification in `write.phylip`; clean up formatting
- Issue#127ahl272025-04-14 19:31Replace deprecated `crayon` with new package for coloring
- Issue#126ahl272025-04-10 20:01[Bug] Overflow causes weird error message in `xscat`
- Issue comment#125yls2g132025-02-27 00:35Can't load Azimuth
- Issue#125yls2g132025-02-27 00:35Can't load Azimuth
- Issue#125yls2g132025-02-27 00:22Can't load Azimuth
- Issue comment#116karlestira2025-02-24 06:19Add zstd support
- Issue comment#124ahl272025-02-21 14:13Fix: minor bug with input verification in `write.phylip`; clean up formatting
- Pull request#123hpages2025-02-21 00:30
- Issue comment#123hpages2025-02-21 00:23feat: Allow custom color palettes for `XString` objects
- Issue comment#124hpages2025-02-20 20:55Fix: minor bug with input verification in `write.phylip`; clean up formatting
- Issue comment#123ahl272025-02-20 20:47feat: Allow custom color palettes for `XString` objects
- Issue comment#123hpages2025-02-20 17:27feat: Allow custom color palettes for `XString` objects
- Issue comment#123ahl272025-02-20 16:43feat: Allow custom color palettes for `XString` objects
- Issue comment#123ahl272025-02-18 14:24feat: Allow custom color palettes for `XString` objects
- Issue comment#123hpages2025-02-18 06:53feat: Allow custom color palettes for `XString` objects
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 23 stars here means stars gained during the window, not the repo's star count.