Scripts to run Density Threshold Affinity Analysis - a method for obtaining free energies of protein-lipid binding. Originally described in: https://pubs.aip.org/aip/jcp/article/154/18/185102/200265/Spontaneous-lipid-binding-to-the-nicotinic and subsequently refined in: https://doi.org/10.1016/bs.mie.2024.03.008
active 2024-03-27 → 2026-08-10 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 867 days from 2024-03-27 to 2026-08-10. Pushes: 559 total, peak 17 in a day. Pull requests: 78 total, peak 6 in a day. Issues: 149 total, peak 9 in a day. Comments: 91 total, peak 13 in a day. Stars: 2 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| JesseSandberg | 759 | 508 | 47 | 67 |
| JahmalEnnis | 58 | 21 | 14 | 5 |
| gbrannigan | 49 | 13 | 9 | 6 |
| EzryStIago | 39 | 9 | 8 | 6 |
| lms464 | 14 | 8 | 0 | 5 |
| coderabbitai[bot] | 2 | 0 | 0 | 2 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#315coderabbitai[bot]2026-08-07 16:30Add copy method to Site classes and add tests for all Site classes
- Issue#3JesseSandberg2026-08-07 16:21Error handling isn't up to code
- Issue comment#3JesseSandberg2026-08-07 16:21Error handling isn't up to code
- Pull request#264JesseSandberg2026-04-22 18:39
- Pull request#261JesseSandberg2026-03-25 20:15
- Pull request#250JesseSandberg2026-03-18 18:33
- Pull request#250JesseSandberg2026-03-02 20:23
- Pull request#248JesseSandberg2026-03-01 15:09
- Pull request#248JesseSandberg2026-02-19 15:56
- Pull request#242JesseSandberg2025-12-17 18:36
- Issue#232JesseSandberg2025-12-16 15:54Need cached compilation of VMD
- Issue comment#237JesseSandberg2025-12-16 15:08Need to decide how to better place helix locations
- Issue comment#124JesseSandberg2025-12-15 17:48load_inclusion_helices/get_helices
- Issue#236JesseSandberg2025-12-12 20:58Need a warning about helix dots on membrane
- Issue#235JahmalEnnis2025-12-12 18:22leaflet sorting frequency errors if it is not a multiple of the number of frames
- Issue#232JesseSandberg2025-12-10 20:16Need cached compilation of VMD
- Issue#232JesseSandberg2025-12-10 20:16Need cached compilation of VMD
- Pull request#231JesseSandberg2025-12-08 14:04
- Pull request#231JesseSandberg2025-12-08 14:04
- Issue#227JesseSandberg2025-11-26 16:39Replace dt with leaflet_reassign_interval in leaflet sorting
- Issue#181JahmalEnnis2025-11-25 17:19make a settings object
- Issue#193JahmalEnnis2025-11-25 17:19Split create_heatmap_figure_and_axes into two
- Issue#221JahmalEnnis2025-11-25 17:19refactor make_density_enrichment_heatmap
- Pull request#226JesseSandberg2025-11-25 02:58
- Pull request#226JesseSandberg2025-11-25 02:58
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 2 stars here means stars gained during the window, not the repo's star count.