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OPERA-MS - Hybrid Metagenomic Assembler

active 2023-08-282026-04-21 (UTC)

Complete coverage26,470 / 26,470 hourly files (100%) · 2 absent upstream2023-08-152026-08-21 (UTC)
Events
175
Pushes
4
Pull requests
0
Issues
51
Stars
16
Forks
3

Activity over time

Daily event counts in the loaded window

Line chart, 968 days from 2023-08-28 to 2026-04-21. Pushes: 4 total, peak 2 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 51 total, peak 25 in a day. Comments: 94 total, peak 11 in a day. Stars: 16 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
jsgounot844048
Hedi6511008
Peterhhb10009
Xinpeng0210019007
blediro7005
ValeriiaLadyhina5003
cimaclean5005
swching4002
pguenzi-tiberi4003
steven-bioinfo3001
ShevchenkoAlla2002
shaze1001
yutoupai1000
PSchneeb1000
marinachen1000
bjkramerumnedu1000

Recent activity

Latest issues, pull requests and releases

  • Issue comment#103jsgounot2026-04-20 00:59
    Installation issues
  • Issue comment#103ShevchenkoAlla2026-04-19 15:03
    Installation issues
  • Issue comment#103ShevchenkoAlla2026-04-19 07:59
    Installation issues
  • Issue#102jsgounot2026-04-17 00:43
    Can't locate File/Which.pm in @INC
  • Issue comment#102jsgounot2026-04-15 14:32
    Can't locate File/Which.pm in @INC
  • Issue#100jsgounot2025-08-21 02:15
    Request for Reference Genomes Used in OPERA-MS Test Dataset
  • Issue comment#100Peterhhb2025-08-21 02:04
    Request for Reference Genomes Used in OPERA-MS Test Dataset
  • Issue comment#100jsgounot2025-08-21 01:45
    Request for Reference Genomes Used in OPERA-MS Test Dataset
  • Issue#100Peterhhb2025-08-20 13:30
    Request for Reference Genomes Used in OPERA-MS Test Dataset
  • Issue comment#99pguenzi-tiberi2025-06-26 12:32
    Segmentation fault short_read_analysis
  • Issue comment#99pguenzi-tiberi2025-06-24 13:03
    Segmentation fault short_read_analysis
  • Issue comment#99pguenzi-tiberi2025-06-24 11:10
    Segmentation fault short_read_analysis
  • Issue#99pguenzi-tiberi2025-06-23 14:01
    Segmentation fault short_read_analysis
  • Issue comment#98jsgounot2025-05-02 02:41
    script is Died at coverage_clustering.pl line 122, <STRAINS> line 913.
  • Issue comment#98Hedi652025-04-28 07:20
    script is Died at coverage_clustering.pl line 122, <STRAINS> line 913.
  • Issue comment#98jsgounot2025-04-28 01:30
    script is Died at coverage_clustering.pl line 122, <STRAINS> line 913.
  • Issue comment#98Hedi652025-04-26 21:32
    script is Died at coverage_clustering.pl line 122, <STRAINS> line 913.
  • Issue comment#98jsgounot2025-04-26 03:52
    script is Died at coverage_clustering.pl line 122, <STRAINS> line 913.
  • Issue comment#98Hedi652025-04-24 12:21
    script is Died at coverage_clustering.pl line 122, <STRAINS> line 913.
  • Issue comment#68jsgounot2025-04-13 02:57
    opera error bwa mapping
  • Issue comment#98jsgounot2025-04-13 02:50
    script is Died at coverage_clustering.pl line 122, <STRAINS> line 913.
  • Issue comment#68Peterhhb2025-04-08 10:06
    opera error bwa mapping
  • Issue comment#68shaze2025-04-08 09:53
    opera error bwa mapping
  • Issue comment#98jsgounot2025-04-06 09:03
    script is Died at coverage_clustering.pl line 122, <STRAINS> line 913.
  • Issue comment#98Hedi652025-04-05 11:05
    script is Died at coverage_clustering.pl line 122, <STRAINS> line 913.

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 16 stars here means stars gained during the window, not the repo's star count.