A Python package using Gromov-Wasserstein distance to compare cell shapes
active 2023-08-18 → 2026-06-15 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1033 days from 2023-08-18 to 2026-06-15. Pushes: 276 total, peak 20 in a day. Pull requests: 6 total, peak 1 in a day. Issues: 6 total, peak 1 in a day. Comments: 16 total, peak 5 in a day. Stars: 10 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| patrick-nicodemus | 258 | 241 | 2 | 12 |
| pcamara | 16 | 15 | 0 | 0 |
| robertkhu | 11 | 11 | 0 | 0 |
| ehgunther | 5 | 5 | 0 | 0 |
| lincolnwu | 4 | 4 | 0 | 0 |
| mrjholt | 3 | 0 | 1 | 1 |
| dependabot[bot] | 2 | 0 | 1 | 1 |
| YuchenXiangEMBL | 2 | 0 | 0 | 1 |
| jg9zk | 1 | 0 | 0 | 0 |
| chenjinyu0723 | 1 | 0 | 0 | 1 |
| schlegelp | 1 | 0 | 1 | 0 |
| yarikoptic | 1 | 0 | 1 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#20mrjholt2025-12-10 01:54Sampling bias in `cell_boundaries` causing division by zero in `avg_shape`
- Pull request#21mrjholt2025-12-10 01:50
- Issue#20mrjholt2025-12-09 23:14Sampling bias in `cell_boundaries` causing division by zero in `avg_shape`
- Issue#19pcamara2025-03-28 12:48Avg shape function clarification
- Releasegithub-actions[bot]2025-01-16 17:07v1.5
- Issue comment#19patrick-nicodemus2025-01-16 16:43Avg shape function clarification
- Issue comment#19patrick-nicodemus2025-01-16 16:35Avg shape function clarification
- Releasegithub-actions[bot]2025-01-14 21:02v1.0.5-alpha.6
- Releasegithub-actions[bot]2025-01-14 20:29v1.0.5-alpha.1
- Issue comment#19chenjinyu07232025-01-06 06:52Avg shape function clarification
- Issue comment#19patrick-nicodemus2024-12-11 22:16Avg shape function clarification
- Issue#19jg9zk2024-12-09 17:31Avg shape function clarification
- Issue comment#17patrick-nicodemus2024-09-27 22:20[WIP] Add functions for query-target distance calculations
- Issue#18patrick-nicodemus2024-09-27 21:24Multiprocessing issue due to dill's recurse=True
- Issue comment#18patrick-nicodemus2024-09-27 21:24Multiprocessing issue due to dill's recurse=True
- Releasegithub-actions[bot]2024-09-24 01:28v1.0.3
- Releasegithub-actions[bot]2024-09-24 00:17v1.0.3
- Releasegithub-actions[bot]2024-09-23 14:41v1.0.3
- Issue comment#18patrick-nicodemus2024-09-23 13:50Multiprocessing issue due to dill's recurse=True
- Pull request#17schlegelp2024-09-11 12:33
- Issue#16patrick-nicodemus2024-08-23 13:25reshuffle of cellID from segmented tiff images with cajal.sample_seg
- Releasegithub-actions[bot]2024-08-22 22:51v1.0.2
- Releasegithub-actions[bot]2024-08-22 19:15v1.0.1-alpha.5
- Releasepatrick-nicodemus2024-08-22 18:50Test CI
- Releasepatrick-nicodemus2024-08-20 17:37v1.0.1-alpha
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 10 stars here means stars gained during the window, not the repo's star count.