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CancerDataAggregator/transform

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Python code for implementing transforms on data extracted from DCs

active 2023-08-162026-04-21 (UTC)

Complete coverage26,352 / 26,352 hourly files (100%) · 2 absent upstream2023-08-152026-08-16 (UTC)
Events
314
Pushes
213
Pull requests
10
Issues
28
Stars
0
Forks
0

Activity over time

Daily event counts in the loaded window

Line chart, 980 days from 2023-08-16 to 2026-04-21. Pushes: 213 total, peak 11 in a day. Pull requests: 10 total, peak 4 in a day. Issues: 28 total, peak 11 in a day. Comments: 15 total, peak 3 in a day. Stars: 0 total, peak 0 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
abradyGDIT253209615
ACharbonneau6000
dionboles-asym5230
ahaessly3210
otchet-broad2000

Recent activity

Latest issues, pull requests and releases

  • Issue#110abradyGDIT2025-11-25 18:48
    Rename CDS to GC in database schema and model docs
  • Issue comment#110abradyGDIT2025-11-25 18:48
    Rename CDS to GC in database schema and model docs
  • Issue comment#118abradyGDIT2025-10-30 18:18
    Verify x_in_project data sources are fully described in model docs for all DCs
  • Issue comment#110abradyGDIT2025-10-22 16:12
    Rename CDS to GC in database schema and model docs
  • Issue#147abradyGDIT2025-10-21 19:58
    Process 2025-10-20 GC dump file v21__October_2025__front_end4.6.0back_end3.1.0.74..dump
  • Issue comment#131abradyGDIT2025-10-21 19:57
    Log historical upstream challenges running CDA ETL
  • Issue#147abradyGDIT2025-10-21 19:55
    Process 2025-10-20 GC dump file v21__October_2025__front_end4.6.0back_end3.1.0.74..dump
  • Issue comment#110abradyGDIT2025-10-20 16:50
    Rename CDS to GC in database schema and model docs
  • Issue comment#145abradyGDIT2025-10-17 21:17
    Process 2025-10-01 CDS dump file v20__September_2025__front_end_4.6.0__back_end_3.1.0.74.dump
  • Issue#145abradyGDIT2025-10-17 21:17
    Process 2025-10-01 CDS dump file v20__September_2025__front_end_4.6.0__back_end_3.1.0.74.dump
  • Issue comment#110abradyGDIT2025-10-17 21:14
    Rename CDS to GC in database schema and model docs
  • Issue#113abradyGDIT2025-10-17 21:12
    Verify entire ETL pipeline is fully disconnected from Broad/GCP resources
  • Issue#104abradyGDIT2025-10-17 21:12
    Rename CDS to GC in ETL code
  • Issue comment#104abradyGDIT2025-10-17 21:12
    Rename CDS to GC in ETL code
  • Issue comment#104abradyGDIT2025-10-16 14:55
    Rename CDS to GC in ETL code
  • Issue#146abradyGDIT2025-10-08 14:51
    Refresh presentation re: external_references for ISB for Mon 2025-10-13
  • Issue comment#144abradyGDIT2025-10-07 20:40
    ETL harmonization logic: identify feasibility: remove all 'NOS' suffixes as part of top-level sweep?
  • Issue#144abradyGDIT2025-10-07 20:39
    ETL harmonization logic: identify feasibility: remove all 'NOS' suffixes as part of top-level sweep?
  • Issue#143abradyGDIT2025-10-07 20:31
    Make any bespoke harmonization logic more prominent than it currently is
  • Issue#139abradyGDIT2025-10-07 19:04
    Fully document CDA cross-DC `subject` aggregation logic for external sharing
  • Issue#137abradyGDIT2025-10-07 19:01
    Add sum(s?) of file sizes to `release_metadata` cache
  • Issue#136abradyGDIT2025-10-07 19:00
    Check potential utility for CDA ETL of pairing GC's `sample.sample_description` and `diagnosis.disease_type`
  • Issue comment#135abradyGDIT2025-10-07 18:58
    Project Harmonization
  • Issue comment#135abradyGDIT2025-10-07 18:57
    Project Harmonization
  • Issue#135ACharbonneau2025-10-07 18:55
    Project Harmonization

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.