A Transformer-based model for read-level DNA methylation pattern identification and tumour deconvolution
active 2024-03-23 → 2026-04-06 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 745 days from 2024-03-23 to 2026-04-06. Pushes: 7 total, peak 2 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 5 total, peak 1 in a day. Comments: 10 total, peak 2 in a day. Stars: 19 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| hanyangii | 12 | 7 | 0 | 5 |
| LiJingqi7 | 4 | 0 | 0 | 3 |
| Zhaooooooooooo | 2 | 0 | 0 | 1 |
| methygene | 2 | 0 | 0 | 1 |
| LiymLab | 1 | 0 | 0 | 0 |
| isadeghi87 | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#23LiymLab2025-06-16 03:22MethylBERT Usage on Plasma cfDNA
- Issue comment#18LiJingqi72025-06-03 04:04Issue with Tumor Fraction Prediction Using Pre-trained MethylBERT
- Issue comment#22hanyangii2025-05-27 09:34About read classificaiton of methylbert
- Issue comment#22Zhaooooooooooo2025-05-06 04:21About read classificaiton of methylbert
- Issue#21Zhaooooooooooo2025-04-28 04:05About the fine-tuning model
- Issue comment#19hanyangii2025-04-17 06:26MM/ML tag to XM tag converter
- Issue comment#18hanyangii2025-04-17 06:20Issue with Tumor Fraction Prediction Using Pre-trained MethylBERT
- Issue comment#18LiJingqi72025-04-02 03:14Issue with Tumor Fraction Prediction Using Pre-trained MethylBERT
- Issue#18LiJingqi72025-03-27 03:45Issue with Tumor Fraction Prediction Using Pre-trained MethylBERT
- Issue comment#13LiJingqi72025-03-27 03:41mm 10 pre-trained model cannot be restored properly
- Issue#17isadeghi872025-02-02 22:25issue with installation
- Issue comment#16hanyangii2025-01-25 11:51Issue installing methylbert using conda and pip
- Issue comment#14hanyangii2025-01-10 22:12pysam installation in python 3.11
- Issue#7methygene2024-03-23 14:40Support hg38 alignment samples
- Issue comment#7methygene2024-03-23 14:40Support hg38 alignment samples
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 19 stars here means stars gained during the window, not the repo's star count.