Skip to content

ComparativeGenomicsToolkit/taffy

View on GitHub ↗Related repositories →

This is a library C/Python/CLI for working with TAF (.taf,.taf.gz) and MAF (.maf) alignment files

active 2024-04-282026-07-30 (UTC)

Partial coverage16,111 / 20,115 hourly files (80%) · 2 absent upstream · 4,003 failed, retryable2024-04-252026-08-12 (UTC)— sampled evenly across the window, so rankings and trends hold; absolute counts scale up.
Events
84
Pushes
50
Pull requests
19
Issues
2
Stars
3
Forks
2

Activity over time

Daily event counts in the loaded window

Line chart, 824 days from 2024-04-28 to 2026-07-30. Pushes: 50 total, peak 7 in a day. Pull requests: 19 total, peak 6 in a day. Issues: 2 total, peak 1 in a day. Comments: 4 total, peak 2 in a day. Stars: 3 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
benedictpaten3924141
glennhickey312632
diekhans2001
cmdcolin1010
SaimMomin121000
cyborgdnx1010

Recent activity

Latest issues, pull requests and releases

  • Issue#80SaimMomin122026-01-20 13:12
    Bioconda package for taffy
  • Pull request#79glennhickey2025-08-26 14:27
  • Pull request#78glennhickey2025-08-26 14:27
  • Pull request#79benedictpaten2025-08-12 22:49
  • Pull request#76benedictpaten2025-08-08 17:03
  • Pull request#76benedictpaten2025-08-08 17:02
  • Issue comment#75glennhickey2025-08-04 02:02
    taffy norm affected by changes between blocks (that aren't in rows to be merged)
  • Issue comment#75glennhickey2025-08-04 01:24
    taffy norm affected by changes between blocks (that aren't in rows to be merged)
  • Pull request#74cmdcolin2025-01-04 18:47
  • Pull request#73benedictpaten2024-12-16 04:21
  • Pull request#73benedictpaten2024-12-16 04:21
  • Pull request#72benedictpaten2024-12-07 01:17
  • Pull request#72benedictpaten2024-12-07 01:17
  • Pull request#67benedictpaten2024-11-15 00:07
  • Issue comment#62diekhans2024-07-17 00:19
    taffy view with a --region SEGVs when stdin as input
  • Issue comment#62benedictpaten2024-07-16 23:49
    taffy view with a --region SEGVs when stdin as input
  • Issue#62diekhans2024-07-16 23:45
    taffy view with a --region SEGVs when stdin as input
  • Pull request#61cyborgdnx2024-05-18 21:29
  • Pull request#60benedictpaten2024-05-17 20:54
  • Pull request#60benedictpaten2024-05-17 20:54
  • Pull request#59benedictpaten2024-05-17 20:50
  • Pull request#59benedictpaten2024-05-17 20:50
  • Pull request#49benedictpaten2024-05-17 18:10
  • Pull request#50benedictpaten2024-05-17 18:10
  • Pull request#57glennhickey2024-05-04 01:12

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 3 stars here means stars gained during the window, not the repo's star count.