Regulatory Genomics Toolbox: Python library and set of tools for the integrative analysis of high throughput regulatory genomics data.
active 2023-08-22 → 2026-02-24 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 918 days from 2023-08-22 to 2026-02-24. Pushes: 5 total, peak 1 in a day. Pull requests: 3 total, peak 1 in a day. Issues: 32 total, peak 2 in a day. Comments: 32 total, peak 2 in a day. Stars: 15 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| RaghadShu | 7 | 0 | 1 | 3 |
| lzj1769 | 6 | 2 | 1 | 2 |
| gf5634 | 6 | 0 | 0 | 3 |
| chaochungkuo | 4 | 3 | 0 | 1 |
| dmitrymyl | 4 | 0 | 0 | 1 |
| zisweet | 4 | 0 | 0 | 2 |
| kelly-sovacool | 3 | 0 | 0 | 2 |
| sathvik-samaga | 3 | 0 | 0 | 0 |
| nihenniuwa | 3 | 0 | 0 | 2 |
| konsta-kukkonen | 3 | 0 | 0 | 1 |
| robertwinkler-research | 2 | 0 | 0 | 2 |
| francicco | 2 | 0 | 0 | 1 |
| panxianrun | 2 | 0 | 0 | 2 |
| sunta3iouxos | 2 | 0 | 0 | 0 |
| songw01 | 2 | 0 | 0 | 2 |
| lyx-lin | 2 | 0 | 0 | 0 |
| Ludomont | 2 | 0 | 0 | 1 |
| romain-giraud | 2 | 0 | 0 | 1 |
| TomMakesThings | 2 | 0 | 0 | 2 |
| JianxunHan | 2 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Pull request#295minashaigan2025-11-03 11:24
- Issue comment#152robertwinkler-research2025-10-22 20:22Allow all input files to be specified on the command line
- Issue comment#294robertwinkler-research2025-10-22 20:04Request: Support conda installation without separate rgtdata download
- Issue#292SophieEhres2025-07-30 15:00rgt-TDF AttributeError: 'Statistics' object has no attribute 'tpx_ndef'
- Issue comment#291panxianrun2025-07-08 07:45RGT package on PyPi does not install due to deprecation of numpy.distutils
- Issue comment#291panxianrun2025-07-08 06:58RGT package on PyPi does not install due to deprecation of numpy.distutils
- Issue comment#290Ludomont2025-05-21 09:00--motif-dbs parameter in rgtmotifanalysis matching doesn't work
- Issue comment#290romain-giraud2025-05-20 13:14--motif-dbs parameter in rgtmotifanalysis matching doesn't work
- Issue#290Ludomont2025-05-06 09:54--motif-dbs parameter in rgtmotifanalysis matching doesn't work
- Issue#289romain-giraud2025-04-28 10:30P value adjustment for HINT differential analysis
- Issue#288SchwarzMarek2025-02-13 15:57rgt-THOR should the exts be 0 for paired end reads?
- Issue comment#281TomMakesThings2025-01-24 19:21P-value THOR
- Issue comment#268TomMakesThings2025-01-23 22:15Deprecation warnings, non-compatibility with python 3.12, libpng12.so.0
- Issue#287patrycjas022025-01-13 11:58metadata-generation-failed
- Issue#282konsta-kukkonen2024-12-23 08:21HINT-ATAC differential: uniform y-axis for different plots
- Issue comment#282konsta-kukkonen2024-12-23 08:20HINT-ATAC differential: uniform y-axis for different plots
- Issue comment#285nihenniuwa2024-12-01 08:10rgt-hint differential Error
- Issue comment#285songw012024-12-01 00:48rgt-hint differential Error
- Issue comment#285nihenniuwa2024-11-29 03:31rgt-hint differential Error
- Issue comment#285songw012024-11-28 15:54rgt-hint differential Error
- Issue#286xiasijian2024-10-23 14:41Why do columns "V4" have negative value?
- Issue#285nihenniuwa2024-10-08 00:30rgt-hint differential Error
- Issue comment#284chaochungkuo2024-09-29 20:19rgt-TDF problem
- Issue#284Charbelfeg2024-09-26 12:25rgt-TDF problem
- Issue#283lyx-lin2024-09-23 23:26genome_hg38.fa
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 15 stars here means stars gained during the window, not the repo's star count.