Whole cell model of E. coli implemented with Vivarium
active 2024-06-25 → 2026-08-13 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 780 days from 2024-06-25 to 2026-08-13. Pushes: 1,375 total, peak 44 in a day. Pull requests: 263 total, peak 18 in a day. Issues: 7 total, peak 2 in a day. Comments: 250 total, peak 12 in a day. Stars: 12 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| thalassemia | 1.1K | 737 | 223 | 47 |
| github-actions[bot] | 315 | 144 | 18 | 153 |
| cyrus-bio | 104 | 97 | 7 | 0 |
| mpg19 | 83 | 82 | 0 | 0 |
| Shu-Feather | 70 | 50 | 6 | 10 |
| heenasaqib | 67 | 63 | 1 | 0 |
| alberthqzhang | 67 | 65 | 2 | 0 |
| arnabmutsuddy | 39 | 37 | 0 | 1 |
| Copilot | 38 | 0 | 0 | 17 |
| Robotato | 28 | 22 | 1 | 3 |
| rjuenemann | 23 | 21 | 0 | 1 |
| prismofeverything | 19 | 12 | 0 | 5 |
| cplong90 | 13 | 11 | 0 | 1 |
| eagmon | 10 | 10 | 0 | 0 |
| timzjing | 9 | 7 | 0 | 1 |
| radler3 | 7 | 7 | 0 | 0 |
| github-advanced-security[bot] | 5 | 0 | 0 | 3 |
| aalemay | 5 | 5 | 0 | 0 |
| dependabot[bot] | 3 | 0 | 1 | 2 |
| copilot-pull-request-reviewer[bot] | 3 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Pull request#423github-actions[bot]2026-05-20 05:48
- Pull request#418thalassemia2026-05-19 20:48
- Pull request#421github-actions[bot]2026-05-13 00:57
- Issue comment#420github-actions[bot]2026-05-13 00:13Document limitation with N-D array emits
- Pull request#418thalassemia2026-05-11 22:56
- Pull request#417github-actions[bot]2026-05-10 00:26
- Issue comment#417github-actions[bot]2026-05-08 01:43Security updates
- Pull request#417thalassemia2026-05-08 01:35
- Pull request#413thalassemia2026-04-27 21:48
- Issue comment#412github-actions[bot]2026-04-24 22:56Pin Nextflow version and add basic contributor guide
- Issue comment#412github-actions[bot]2026-04-24 22:56Pin Nextflow version and add basic contributor guide
- Issue comment#411rjuenemann2026-04-24 22:22Ignore local workflow job failures
- Issue comment#409Robotato2026-04-14 22:23Selected fluxes analysis plot
- Issue comment#409github-actions[bot]2026-04-14 00:46Selected fluxes analysis plot
- Pull request#409Robotato2026-04-14 00:17
- Issue comment#405github-actions[bot]2026-04-09 03:13Security updates
- Pull request#405thalassemia2026-04-09 03:04
- Issue comment#404github-actions[bot]2026-04-08 22:15Update security update PR body even when contents do not change
- Issue comment#401dependabot[bot]2026-04-05 04:09chore(deps): update: bump the uv group across 1 directory with 3 updates
- Pull request#403thalassemia2026-04-03 08:48
- Issue comment#402github-actions[bot]2026-04-03 05:51Fix handling of NumPy array variant params
- Pull request#402thalassemia2026-04-03 05:46
- Issue comment#388github-actions[bot]2026-04-02 00:24Security updates
- Pull request#388thalassemia2026-04-02 00:16
- Pull request#388thalassemia2026-04-02 00:14
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 12 stars here means stars gained during the window, not the repo's star count.