A deep learning approach to predicting transcription initiation from sequence at single nucleotide resolution
active 2024-01-25 → 2026-07-14 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 902 days from 2024-01-25 to 2026-07-14. Pushes: 360 total, peak 44 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 4 total, peak 1 in a day. Comments: 7 total, peak 3 in a day. Stars: 16 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| adamyhe | 365 | 360 | 0 | 4 |
| ChrisMimir | 4 | 0 | 0 | 2 |
| zhangjy859 | 2 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Releaseadamyhe2025-06-07 13:27v0.2.0
- Issue#2ChrisMimir2025-01-08 08:14AssertionError: The SHAP explanations do not sum up to the model's output
- Issue comment#2ChrisMimir2025-01-07 22:12AssertionError: The SHAP explanations do not sum up to the model's output
- Issue comment#2adamyhe2025-01-07 10:20AssertionError: The SHAP explanations do not sum up to the model's output
- Issue comment#2ChrisMimir2025-01-07 07:56AssertionError: The SHAP explanations do not sum up to the model's output
- Issue comment#2adamyhe2025-01-06 23:13AssertionError: The SHAP explanations do not sum up to the model's output
- Issue#2ChrisMimir2025-01-06 19:00AssertionError: The SHAP explanations do not sum up to the model's output
- Releaseadamyhe2024-09-17 09:27
- Releaseadamyhe2024-05-05 04:41Preprint version
- Issue comment#1adamyhe2024-04-12 11:53Can the standard reference genome be directly used as input?
- Issue#1adamyhe2024-04-12 11:53Can the standard reference genome be directly used as input?
- Issue comment#1zhangjy8592024-04-12 02:09Can the standard reference genome be directly used as input?
- Issue comment#1adamyhe2024-04-11 09:28Can the standard reference genome be directly used as input?
- Issue#1zhangjy8592024-04-11 05:39Can the standard reference genome be directly used as input?
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 16 stars here means stars gained during the window, not the repo's star count.