Generate consensus 3D cells segmentations by combining 2D cell segmentations from any combination of xy, xz, yz views, compatible with outputs of any 2D segmentation method.
active 2024-09-25 → 2026-04-07 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 560 days from 2024-09-25 to 2026-04-07. Pushes: 5 total, peak 2 in a day. Pull requests: 1 total, peak 1 in a day. Issues: 6 total, peak 1 in a day. Comments: 17 total, peak 8 in a day. Stars: 21 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| fyz11 | 12 | 0 | 0 | 11 |
| CheLamVien | 8 | 0 | 1 | 4 |
| DanuserLab | 5 | 5 | 0 | 0 |
| yw254 | 2 | 0 | 0 | 1 |
| yjc-jicheng | 1 | 0 | 0 | 0 |
| HanyingYan | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue#13yw2542026-02-24 17:28cpsam direct method
- Issue comment#14HanyingYan2026-02-06 04:51Issue Running Anisotropic Tutorial
- Issue comment#13yw2542026-01-30 20:53cpsam direct method
- Issue comment#13fyz112026-01-29 04:57cpsam direct method
- Issue comment#10fyz112025-12-10 03:50Installation on Windows 11 does not work
- Issue#11fyz112025-12-10 03:49Post-processing bug
- Issue comment#11fyz112025-12-10 03:49Post-processing bug
- Issue#9yjc-jicheng2025-11-19 08:45segment3D_demodatac
- Pull request#8CheLamVien2025-06-26 18:45
- Issue comment#7fyz112025-05-22 03:39Memory requirements
- Issue comment#5CheLamVien2025-02-19 06:15Problem with uSegment3D_watershed.gradient_watershed2D_binary
- Issue#5CheLamVien2025-02-19 06:15Problem with uSegment3D_watershed.gradient_watershed2D_binary
- Issue comment#5fyz112025-02-19 04:37Problem with uSegment3D_watershed.gradient_watershed2D_binary
- Issue#5CheLamVien2025-01-09 23:13Problem with uSegment3D_watershed.gradient_watershed2D_binary
- Issue comment#4CheLamVien2024-09-27 12:08Parameter selection to Improve the segmentation
- Issue#4CheLamVien2024-09-27 12:08Parameter selection to Improve the segmentation
- Issue comment#4fyz112024-09-27 11:48Parameter selection to Improve the segmentation
- Issue comment#4CheLamVien2024-09-27 11:26Parameter selection to Improve the segmentation
- Issue comment#4fyz112024-09-27 11:02Parameter selection to Improve the segmentation
- Issue comment#4fyz112024-09-27 10:49Parameter selection to Improve the segmentation
- Issue comment#4CheLamVien2024-09-27 10:39Parameter selection to Improve the segmentation
- Issue comment#4fyz112024-09-27 09:25Parameter selection to Improve the segmentation
- Issue comment#4fyz112024-09-27 09:16Parameter selection to Improve the segmentation
- Issue comment#4fyz112024-09-25 18:26Parameter selection to Improve the segmentation
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 21 stars here means stars gained during the window, not the repo's star count.