The Flexible Demultiplexer
active 2023-08-15 → 2026-04-14 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 974 days from 2023-08-15 to 2026-04-14. Pushes: 94 total, peak 9 in a day. Pull requests: 43 total, peak 4 in a day. Issues: 60 total, peak 9 in a day. Comments: 101 total, peak 12 in a day. Stars: 29 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| nadiadavidson | 122 | 53 | 6 | 36 |
| olliecheng | 105 | 41 | 23 | 29 |
| ChangqingW | 28 | 0 | 10 | 16 |
| ghar1821 | 6 | 0 | 0 | 4 |
| ashokpatowary | 6 | 0 | 0 | 5 |
| yxsee | 5 | 0 | 0 | 2 |
| ljwharbers | 5 | 0 | 0 | 3 |
| yinshiyi | 4 | 0 | 1 | 0 |
| nrhorner | 3 | 0 | 0 | 1 |
| denosawr | 3 | 0 | 3 | 0 |
| rickbeeloo | 3 | 0 | 0 | 2 |
| karolina16 | 2 | 0 | 0 | 1 |
| Shians | 1 | 0 | 0 | 0 |
| koehlek99 | 1 | 0 | 0 | 0 |
| zeratulhx | 1 | 0 | 0 | 0 |
| andredsim | 1 | 0 | 0 | 1 |
| Zepeng-Mu | 1 | 0 | 0 | 0 |
| mcortes-lopez | 1 | 0 | 0 | 0 |
| Kyung-TaeLee | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#78nadiadavidson2026-04-14 10:35Trim TSO on read end
- Issue#78Zepeng-Mu2026-04-11 19:18Trim TSO on read end
- Releasenadiadavidson2026-03-30 03:57Version-1.02.6
- Issue comment#59nadiadavidson2026-03-19 23:49Add option to not trim reads but still report barcodes/UMIs in read ID
- Issue#76nadiadavidson2026-02-28 10:28Print error is known barcode file doesn't exist
- Issue#70nadiadavidson2026-02-28 10:10Segfault when demultiplexing without a UMI, only when using GH Actions build
- Pull request#74olliecheng2026-02-28 10:10
- Issue comment#75ChangqingW2026-01-19 03:24Allow multiple barcode segments (e.g. split-seq)
- Pull request#75ChangqingW2026-01-16 10:54
- Pull request#74olliecheng2026-01-09 01:32
- Issue comment#72olliecheng2025-12-25 08:24idea to add error catching to avoid core dump
- Pull request#73yinshiyi2025-12-24 19:20
- Issue#72yinshiyi2025-12-24 18:58idea to add error catching to avoid core dump
- Issue#71yinshiyi2025-12-24 18:11ideas on 2-sided demux
- Issue#71yinshiyi2025-12-23 21:57ideas on 2-sided demux
- Issue#60nadiadavidson2025-11-19 04:17Add option to only search N bp at start or end of reads.
- Issue comment#60nadiadavidson2025-11-19 04:17Add option to only search N bp at start or end of reads.
- Issue#11nadiadavidson2025-11-19 04:16Add option of reporting all read (not just hits), but appending barcodes to reads ID.
- Issue#5nadiadavidson2025-11-19 04:14Add option to report reads with no match (output 2 files?)
- Issue comment#68nadiadavidson2025-11-19 04:14Option to report two files: one demultiplexed and one where barcode wasn't identified.
- Issue#68nadiadavidson2025-11-19 04:12Option to report two files: one demultiplexed and one where barcode wasn't identified.
- Issue comment#67olliecheng2025-09-10 00:54flexiplex not installable when Python is pinned to 3.13 (no py3.13 builds)
- Issue#67olliecheng2025-09-10 00:54flexiplex not installable when Python is pinned to 3.13 (no py3.13 builds)
- Issue comment#67olliecheng2025-09-07 12:14flexiplex not installable when Python is pinned to 3.13 (no py3.13 builds)
- Issue#67zeratulhx2025-09-04 04:25flexiplex not installable when Python is pinned to 3.13 (no py3.13 builds)
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 29 stars here means stars gained during the window, not the repo's star count.