Tools for Unmixing Spectral Flow Cytometry Data
active 2025-10-28 → 2026-07-20 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 266 days from 2025-10-28 to 2026-07-20. Pushes: 70 total, peak 3 in a day. Pull requests: 1 total, peak 1 in a day. Issues: 11 total, peak 1 in a day. Comments: 16 total, peak 2 in a day. Stars: 10 total, peak 3 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| DrCytometer | 87 | 70 | 0 | 12 |
| SamGG | 5 | 0 | 1 | 1 |
| bend91 | 2 | 0 | 0 | 1 |
| krao02 | 1 | 0 | 0 | 0 |
| claude-chew | 1 | 0 | 0 | 1 |
| juliesemenchuk3-lab | 1 | 0 | 0 | 0 |
| domenicabbondanza | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue#31SamGG2026-04-19 08:25Speed up readBin/read.FCS
- Issue comment#27DrCytometer2026-04-10 15:40S8 channel loss during unmixing
- Issue comment#20DrCytometer2026-02-09 13:58Unmix.fcs failure
- Issue comment#22DrCytometer2026-02-07 18:25get.fluorophore.spectra errors
- Issue#22juliesemenchuk3-lab2026-02-07 04:21get.fluorophore.spectra errors
- Issue comment#17DrCytometer2026-01-19 09:20Unable to install due to dependency "EmbedSOM" being unavailable
- Issue#18DrCytometer2026-01-19 09:19Area flag "-A" inappropriately added to non-fluorescence channels
- Issue comment#17DrCytometer2026-01-15 16:28Unable to install due to dependency "EmbedSOM" being unavailable
- Issue#18DrCytometer2026-01-15 08:02Area flag "-A" inappropriately added to non-fluorescence channels
- Issue comment#13claude-chew2026-01-14 17:25I have been having a persistent error when trying to get spectral variants for ID7000 data. I have managed to get it to work for Aurora and Xenith but when calling get.spectral.variants using the following:
- Issue comment#17domenicabbondanza2026-01-07 21:09Unable to install due to dependency "EmbedSOM" being unavailable
- Pull request#16SamGG2025-12-11 22:09
- Issue#15SamGG2025-12-09 17:55Make it clearer and faster
- Issue comment#14SamGG2025-12-07 19:23Some improvements
- Issue comment#14DrCytometer2025-12-07 18:21Some improvements
- Issue#14SamGG2025-12-05 15:08Some improvements
- Issue comment#13DrCytometer2025-12-03 07:32I have been having a persistent error when trying to get spectral variants for ID7000 data. I have managed to get it to work for Aurora and Xenith but when calling get.spectral.variants using the following:
- Issue#8DrCytometer2025-12-01 10:50FACSymphony A5 SE support
- Issue comment#8DrCytometer2025-11-26 10:15FACSymphony A5 SE support
- Issue#7DrCytometer2025-11-20 15:32FACSDiscover weighting
- Issue comment#5DrCytometer2025-11-07 10:35Bug report: define.flow.control() fails to detect existing scatter channels
- Issue#2DrCytometer2025-11-05 05:05Error when AF is not found in the definition table
- Issue comment#2DrCytometer2025-11-05 05:05Error when AF is not found in the definition table
- Issue comment#2bend912025-11-04 14:16Error when AF is not found in the definition table
- Issue comment#3DrCytometer2025-11-04 08:04Error in recognising FSC-A, SSC-A & Time in FCS files
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 10 stars here means stars gained during the window, not the repo's star count.