Repository for the main MAVISp data processing pipeline
active 2025-06-04 → 2026-07-30 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 422 days from 2025-06-04 to 2026-07-30. Pushes: 34 total, peak 5 in a day. Pull requests: 10 total, peak 1 in a day. Issues: 26 total, peak 4 in a day. Comments: 3 total, peak 2 in a day. Stars: 1 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| mtiberti | 26 | 8 | 2 | 3 |
| pablosanchezizquierdo | 23 | 16 | 4 | 0 |
| elenapapaleo | 13 | 3 | 0 | 0 |
| elenikiachaki | 12 | 6 | 2 | 0 |
| drgbea | 2 | 0 | 1 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#147drgbea2026-04-14 15:11
- Issue#141drgbea2026-04-09 09:38Add Glycosilation information to output of pipeline
- Issue#135pablosanchezizquierdo2026-01-22 14:42Update mentha2pdb script in mavisp_templates to use newest version
- Pull request#131elenikiachaki2026-01-21 10:07
- Issue#129elenapapaleo2025-10-31 18:25TED annotation is not copied to `simple_mode` output folder
- Issue#126mtiberti2025-10-21 07:51Add target rule that doesn't run steps necessary for IDPs
- Pull request#125pablosanchezizquierdo2025-10-20 12:03
- Issue#117mtiberti2025-10-20 11:28Using mutatex trimmed model and genrate the csv from it with pLDDT and DSSP values
- Issue#122mtiberti2025-10-15 11:40Update `mentha2pdb` in template
- Pull request#123mtiberti2025-10-15 10:48
- Issue#122mtiberti2025-10-15 10:01Update `mentha2pdb` in template
- Issue#119mtiberti2025-10-15 06:52Fix compatibility of pipeline with new version of Cancermuts
- Issue#115elenapapaleo2025-10-07 10:40verify if original model need revision to interact with different AFDB versions
- Issue#108mtiberti2025-09-23 13:56Introduce aggregation of interactome data
- Pull request#111pablosanchezizquierdo2025-09-22 08:41
- Pull request#111elenikiachaki2025-09-16 14:43
- Issue#77elenikiachaki2025-09-16 07:45introduce support to STRING2PDB
- Issue#103elenapapaleo2025-09-15 20:40removal of netphos folder and clinvar
- Issue#106elenapapaleo2025-09-15 20:40update to support the new version of Cosmic
- Pull request#107pablosanchezizquierdo2025-09-12 11:40
- Pull request#105mtiberti2025-07-23 09:17
- Issue#104elenikiachaki2025-07-03 13:19Add STRING2PDB Step to Snakemake
- Issue#103elenapapaleo2025-07-01 06:35removal of netphos folder and clinvar
- Issue#92elenapapaleo2025-07-01 06:34introduce support to globularity metrics
- Pull request#102pablosanchezizquierdo2025-06-30 11:03
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 1 stars here means stars gained during the window, not the repo's star count.