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Software for the automatic annotation of cancer mutations

active 2023-10-062026-07-31 (UTC)

Partial coverage20,508 / 26,264 hourly files (78%) · 2 absent upstream · 5,753 failed, retryable2023-08-152026-08-13 (UTC)— sampled evenly across the window, so rankings and trends hold; absolute counts scale up.
Events
281
Pushes
87
Pull requests
21
Issues
22
Stars
1
Forks
0

Activity over time

Daily event counts in the loaded window

Line chart, 1030 days from 2023-10-06 to 2026-07-31. Pushes: 87 total, peak 4 in a day. Pull requests: 21 total, peak 2 in a day. Issues: 22 total, peak 3 in a day. Comments: 84 total, peak 14 in a day. Stars: 1 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
mtiberti11824848
elenikiachaki322333
pablosanchezizquierdo311826
a-estad272012
drgbea8422
elenapapaleo8103
AlessiaCampo5211
EszterToldi1100

Recent activity

Latest issues, pull requests and releases

  • Pull request#297pablosanchezizquierdo2026-07-31 09:22
  • Pull request#283drgbea2026-06-11 12:21
  • Pull request#265elenikiachaki2026-05-05 09:03
  • Pull request#267pablosanchezizquierdo2026-04-23 09:03
  • Issue comment#260elenapapaleo2026-04-20 22:12
    ClinVar assembly-specific genomic annotation causes cancermuts crash for OPTN variant 703420
  • Issue#234elenapapaleo2026-04-20 22:11
    Add support for AlphaMissense as a data source
  • Issue comment#234elenapapaleo2026-04-20 22:11
    Add support for AlphaMissense as a data source
  • Issue#263mtiberti2026-03-30 13:58
    Cancermuts API overhaul - towards 2.0
  • Issue comment#257drgbea2026-03-24 15:08
    Fix255 db ptm source
  • Issue comment#244mtiberti2026-03-10 13:20
    Cancermuts only retrieves germline classification for clinvar variants
  • Issue#254mtiberti2026-03-03 14:43
    `UniProt` should return a `Sequence` object with set `.isoform` when no isoform is requested
  • Issue#252mtiberti2026-03-03 12:21
    When `gnomAD` fails to parse API data, it should raise an exception
  • Pull request#249drgbea2025-12-12 08:57
  • Pull request#245elenikiachaki2025-11-21 15:22
  • Issue comment#236mtiberti2025-11-14 15:04
    Filter out clinvar delins mutations that result in multiple missense changes
  • Issue#238mtiberti2025-11-14 14:31
    Cancermuts crashes for clinvar entries with missing metadata
  • Pull request#239elenikiachaki2025-11-06 09:37
  • Issue#235mtiberti2025-11-05 10:05
    back-map protein mutations to genomic mutations
  • Issue comment#232mtiberti2025-10-23 15:41
    Added condition in GenomicMutation to remove definition nans values
  • Pull request#232AlessiaCampo2025-10-21 20:11
  • Issue#231mtiberti2025-10-21 13:34
    `COSMIC` data source class doesn't handle correctly cases with blank genomic mutation
  • Issue comment#219mtiberti2025-10-03 10:53
    add ClinVar as mutation source
  • Pull request#223mtiberti2025-10-03 10:53
  • Issue comment#43mtiberti2025-09-26 13:34
    Better support for multiple isoforms
  • Issue#43mtiberti2025-09-26 13:34
    Better support for multiple isoforms

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 1 stars here means stars gained during the window, not the repo's star count.