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RNA secondary structure/sequence profiles for homology search and alignment

active 2023-08-222026-07-17 (UTC)

Complete coverage26,680 / 26,680 hourly files (100%) · 2 absent upstream2023-08-152026-08-30 (UTC)
Events
173
Pushes
48
Pull requests
3
Issues
14
Stars
53
Forks
7

Activity over time

Daily event counts in the loaded window

Line chart, 1061 days from 2023-08-22 to 2026-07-17. Pushes: 48 total, peak 6 in a day. Pull requests: 3 total, peak 2 in a day. Issues: 14 total, peak 3 in a day. Comments: 36 total, peak 6 in a day. Stars: 53 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
nawrockie6643114
cryptogenomicon11505
Abieskawa4003
mr-c3021
queirozhanna3003
sjanssen23002
JuseTiZ2001
npcarter2002
jflucier2001
octolis2002
BioOmics1001
qifei91000
gaboentropy1001

Recent activity

Latest issues, pull requests and releases

  • Issue comment#48cryptogenomicon2026-03-11 10:46
    infernal version
  • Issue comment#45JuseTiZ2025-08-09 03:35
    Improve multithreaded performance of cmscan
  • Issue#45JuseTiZ2025-08-09 03:35
    Improve multithreaded performance of cmscan
  • Issue comment#45nawrockie2025-08-06 14:13
    Improve multithreaded performance of cmscan
  • Issue comment#45BioOmics2025-08-06 02:58
    Improve multithreaded performance of cmscan
  • Issue comment#44Abieskawa2025-01-18 06:42
    How to integrate Infernal output with tRNAscan SE 2.0
  • Issue comment#44Abieskawa2025-01-18 05:56
    How to integrate Infernal output with tRNAscan SE 2.0
  • Issue comment#44Abieskawa2025-01-16 08:15
    How to integrate Infernal output with tRNAscan SE 2.0
  • Issue comment#44nawrockie2025-01-15 15:52
    How to integrate Infernal output with tRNAscan SE 2.0
  • Issue#44Abieskawa2025-01-15 05:51
    How to integrate Infernal output with tRNAscan SE 2.0
  • Issue comment#16octolis2024-05-23 09:19
    Converting cmscan output to GFF3
  • Issue comment#43nawrockie2024-04-26 16:19
    cmpress fails without useful information when .cm file contains 2 models with identical NAME
  • Issue#43nawrockie2024-04-26 16:19
    cmpress fails without useful information when .cm file contains 2 models with identical NAME
  • Issue#16nawrockie2024-04-26 14:48
    Converting cmscan output to GFF3
  • Issue#43qifei92024-04-20 14:45
    cmpress fails without useful information when .cm file contains 2 models with identical NAME
  • Issue comment#16nawrockie2024-04-12 16:59
    Converting cmscan output to GFF3
  • Issue comment#42nawrockie2024-04-12 16:22
    cmbuild --refine bug related to fragments
  • Issue#42nawrockie2024-04-12 16:22
    cmbuild --refine bug related to fragments
  • Issue comment#16nawrockie2024-04-12 10:08
    Converting cmscan output to GFF3
  • Issue#16nawrockie2024-04-12 10:08
    Converting cmscan output to GFF3
  • Issue comment#16octolis2024-04-12 09:27
    Converting cmscan output to GFF3
  • Issue#42nawrockie2024-04-11 20:48
    cmbuild --refine bug related to truncated seqs
  • Issue comment#41cryptogenomicon2023-12-09 23:32
    does cmsearch result return a single model found per target sequence
  • Issue comment#41jflucier2023-12-08 21:17
    does cmsearch result return a single model found per target sequence
  • Issue comment#41cryptogenomicon2023-12-08 21:11
    does cmsearch result return a single model found per target sequence

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 53 stars here means stars gained during the window, not the repo's star count.