Evaluation framework for computationally inferred gene networks from single-cell data.
active 2024-04-13 → 2025-10-23 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 559 days from 2024-04-13 to 2025-10-23. Pushes: 39 total, peak 5 in a day. Pull requests: 39 total, peak 9 in a day. Issues: 25 total, peak 9 in a day. Comments: 9 total, peak 3 in a day. Stars: 7 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| aron0093 | 79 | 30 | 25 | 2 |
| adamklie | 30 | 7 | 10 | 7 |
| ymo6 | 2 | 1 | 0 | 0 |
| anderseng | 2 | 0 | 2 | 0 |
| nargesr | 1 | 0 | 1 | 0 |
| HGmin1159 | 1 | 0 | 0 | 0 |
| GaryCloudY | 1 | 0 | 1 | 0 |
| OlgaPushkarev | 1 | 1 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#69aron00932025-09-06 05:57
- Pull request#69aron00932025-09-06 05:57
- Pull request#68aron00932025-09-05 01:05
- Issue#66ymo62025-08-25 20:03Missing dataframe key 'Term' in evaluation src code causes issue in generating figure for k selection plots
- Issue#63aron00932025-08-02 04:34tangermeme FIMO implementation was refactored
- Issue comment#61aron00932025-08-02 04:33Replace current cNMF implementation with a faster version
- Issue#61aron00932025-08-02 04:33Replace current cNMF implementation with a faster version
- Pull request#65aron00932025-08-02 04:31
- Issue#64aron00932025-07-21 18:52DecouplR provides a variety of enrichment tools with a cleaner implementation
- Issue#63aron00932025-07-21 18:49tangermeme FIMO implementation was refactored
- Issue comment#62aron00932024-12-20 21:39GSEA Error
- Issue#62HGmin11592024-12-19 03:57GSEA Error
- Issue#45aron00932024-10-08 01:31Replace `pymemesuite` FIMO implementation with `tangermeme`
- Issue#18aron00932024-10-08 01:31Update README to reflect current state of the evaluations offered
- Issue#48aron00932024-10-08 01:26Rerun Endothelial evaluation pipeline after update
- Issue#44aron00932024-10-08 01:26Rerun iPSC_EC evaluation pipeline after update
- Issue#43aron00932024-10-08 01:25Add Topyic inference in `examples/inference/iPSC_EC/Topyfic`
- Issue#42aron00932024-10-08 01:24Add cNMF inference code to `examples/inference/iPSC_EC/cNMF`
- Issue#19aron00932024-10-08 01:24Should we deprecate all the GRN stuff for now?
- Issue#49aron00932024-10-08 01:23Get a demo dashboard for TeloHAEC on a server and shared
- Issue#61aron00932024-10-08 01:22Replace current cNMF implementation with a faster version
- Pull request#60adamklie2024-10-03 20:37
- Pull request#60aron00932024-10-02 20:59
- Pull request#59adamklie2024-09-25 20:02
- Pull request#59adamklie2024-09-25 20:02
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 7 stars here means stars gained during the window, not the repo's star count.