The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants
active 2025-04-06 → 2026-06-25 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 446 days from 2025-04-06 to 2026-06-25. Pushes: 26 total, peak 3 in a day. Pull requests: 20 total, peak 2 in a day. Issues: 84 total, peak 5 in a day. Comments: 177 total, peak 7 in a day. Stars: 28 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| nakib103 | 52 | 9 | 9 | 23 |
| likhitha-surapaneni | 51 | 9 | 3 | 26 |
| dglemos | 42 | 3 | 6 | 20 |
| ainefairbrother | 30 | 1 | 1 | 21 |
| rickymagner | 9 | 0 | 0 | 5 |
| mluypaert | 7 | 2 | 0 | 3 |
| Stikus | 7 | 0 | 0 | 5 |
| olaaustine | 6 | 0 | 0 | 2 |
| thomasmaurel | 6 | 0 | 0 | 4 |
| mengysun | 5 | 0 | 0 | 5 |
| jamie-m-a | 5 | 2 | 1 | 2 |
| awgymer | 5 | 0 | 0 | 1 |
| fzhbioinfo | 5 | 0 | 0 | 3 |
| dvg-p4 | 5 | 0 | 0 | 3 |
| amhaaningUMN | 4 | 0 | 0 | 3 |
| Karthik-Tempus | 4 | 0 | 0 | 2 |
| Sanaz01 | 4 | 0 | 0 | 3 |
| ggstatgen | 4 | 0 | 0 | 2 |
| pzweuj | 3 | 0 | 0 | 2 |
| mavwolverine | 2 | 0 | 0 | 2 |
Recent activity
Latest issues, pull requests and releases
- Issue#2016ainefairbrother2026-06-25 17:47Issue Feedback on HGVS Nomenclature in Annotation Results
- Issue comment#2002harsh-shukla2026-05-06 16:30Misannotation of a variants
- Issue comment#2007Karthik-Tempus2026-05-03 14:59No recent releases
- Issue#2007Karthik-Tempus2026-04-30 18:14No recent releases
- Issue#2003ainefairbrother2026-04-30 08:14Failed to annotate with VEP when converting physical positions in a VCF file from hg19 to hg38 by CrossMap.
- Issue#2005jinghengchen2026-04-24 17:33Failure to run VEP on certain variants
- Issue comment#1984nakib1032026-04-07 19:32HGVSg and HGVSc notation generated by the REST API response are incorrect for some variants
- Issue comment#1984nakib1032026-03-18 13:46HGVSg and HGVSc notation generated by the REST API response are incorrect for some variants
- Issue comment#1972soliton-2026-03-06 16:26Handle white space in input path
- Issue comment#1971ainefairbrother2026-03-06 10:05Cache param in VCF header line metadata leaks infrastructure details
- Issue comment#1977Karthik-Tempus2026-02-25 16:55VEP (GRCh37 REST) is not annotating HGVSc for variants that span the region outside and within a transcript
- Issue#1979ypradat2026-02-25 15:33CADD plugin WARNING: no match for ref
- Issue comment#1976nakib1032026-02-25 12:18VEP (GRCh37 REST) did not annotate some of the overlapping transcripts/genes for a variant
- Issue comment#1980likhitha-surapaneni2026-02-25 10:48clinvar_somatic_classification not showing any Somatic annotation?
- Issue#1980likhitha-surapaneni2026-02-25 10:47clinvar_somatic_classification not showing any Somatic annotation?
- Issue#1979likhitha-surapaneni2026-02-24 06:04Mysterious WARNING: no match for ref
- Issue#1976Karthik-Tempus2026-02-19 15:58VEP (GRCh37 REST) did not annotate some of the overlapping transcripts/genes for a variant
- Issue comment#1975nakib1032026-02-17 16:36docker container does not have the neccessary dependencies to run `INSTALL.pl` with `--USE_HTTPS_PROTO`
- Issue#1975alkc2026-02-17 09:08docker container does not have the neccessary dependencies to run `INSTALL.pl` with `--USE_HTTPS_PROTO`
- Pull request#1973ainefairbrother2026-02-12 16:20
- Issue comment#1774ramprasadn2026-02-10 19:01Missing annotations for BND variants.
- Issue comment#1964hienbio2026-02-10 08:54substr outside of string at 1342
- Issue comment#1964hienbio2026-02-06 10:54substr outside of string at 1342
- Pull request#1970likhitha-surapaneni2026-02-04 11:39
- Issue comment#1879ainefairbrother2026-02-04 11:38Variant not being annotated
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 28 stars here means stars gained during the window, not the repo's star count.