A microscopy image processing toolkit.
active 2023-08-28 → 2026-06-13 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1021 days from 2023-08-28 to 2026-06-13. Pushes: 130 total, peak 9 in a day. Pull requests: 22 total, peak 4 in a day. Issues: 22 total, peak 5 in a day. Comments: 138 total, peak 31 in a day. Stars: 3 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| Karl-Krauth | 231 | 115 | 11 | 70 |
| CiciTian | 132 | 0 | 9 | 65 |
| k-rl | 8 | 8 | 0 | 0 |
| palmhjell | 8 | 1 | 1 | 3 |
| github-actions[bot] | 6 | 6 | 0 | 0 |
| lanmelo | 2 | 0 | 1 | 0 |
| micah-olivas | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#25lanmelo2026-06-13 18:22Non-contiguous "original" dims cause error
- Pull request#26lanmelo2026-06-10 00:52
- Pull request#24Karl-Krauth2025-06-02 20:04
- Pull request#24palmhjell2025-06-02 19:08
- Issue#23palmhjell2025-04-30 22:04Add "mask" or similar argument to microfluidic_chip_pipe to skip circle finding step
- Issue comment#18palmhjell2025-04-30 21:59Limit scale of adjustments for `microfluidic_chip` button/chamber finding.
- Issue#18palmhjell2025-04-30 21:59Limit scale of adjustments for `microfluidic_chip` button/chamber finding.
- Issue comment#20Karl-Krauth2025-04-03 21:56filter_neighbors assumes it's given a non-empty list of circles.
- Issue#20Karl-Krauth2025-04-03 21:56filter_neighbors assumes it's given a non-empty list of circles.
- Issue comment#21Karl-Krauth2025-04-03 21:55The final circle finding in ButtonFinder doesn't properly convert the image to uint8
- Issue#21Karl-Krauth2025-04-03 21:55The final circle finding in ButtonFinder doesn't properly convert the image to uint8
- Issue comment#22Karl-Krauth2025-04-03 21:55Circle-finding does not accept floating point images
- Issue comment#22palmhjell2025-03-28 21:30Circle-finding does not accept floating point images
- Issue#22micah-olivas2025-03-28 21:14Circle-finding does not accept floating point images
- Issue#21Karl-Krauth2025-03-28 21:03The final circle finding in ButtonFinder doesn't properly convert the image to uint8
- Issue#19Karl-Krauth2025-03-28 21:01filter_leaky assumes that the xp array has a timepoint labelled as 0
- Issue comment#4Karl-Krauth2025-03-23 18:36Reader assumes micromanager ome.tiff files always have channel names.
- Issue#4Karl-Krauth2025-03-23 18:36Reader assumes micromanager ome.tiff files always have channel names.
- Issue comment#2Karl-Krauth2025-03-23 18:35Reader arguments aren't passed in like other component arguments.
- Issue#2Karl-Krauth2025-03-23 18:35Reader arguments aren't passed in like other component arguments.
- Issue comment#18Karl-Krauth2025-03-20 17:33Limit scale of adjustments for `microfluidic_chip` button/chamber finding.
- Issue#18Karl-Krauth2025-03-20 17:33Limit scale of adjustments for `microfluidic_chip` button/chamber finding.
- Issue comment#18palmhjell2025-03-11 22:55Limit scale of adjustments for `microfluidic_chip` button/chamber finding.
- Issue#18palmhjell2025-03-11 22:52Limit scale of adjustments for `microfluidic_chip` button/chamber finding.
- Pull request#17Karl-Krauth2025-01-25 02:16
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 3 stars here means stars gained during the window, not the repo's star count.