Jupyter notebook based genomic data visualization toolkit.
active 2023-08-18 → 2026-05-25 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1012 days from 2023-08-18 to 2026-05-25. Pushes: 18 total, peak 3 in a day. Pull requests: 5 total, peak 2 in a day. Issues: 14 total, peak 4 in a day. Comments: 18 total, peak 3 in a day. Stars: 29 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| Nanguage | 29 | 16 | 2 | 7 |
| wbszhu | 4 | 0 | 1 | 3 |
| zqbake | 3 | 1 | 0 | 1 |
| Phlya | 2 | 0 | 1 | 1 |
| hollierowlands | 2 | 0 | 0 | 1 |
| jamesoccean1 | 2 | 0 | 0 | 1 |
| ggilestro | 2 | 0 | 1 | 0 |
| jiangshan529 | 2 | 0 | 0 | 2 |
| mdozmorov | 2 | 0 | 0 | 2 |
| rikrdo89 | 1 | 0 | 0 | 0 |
| camelest | 1 | 0 | 0 | 0 |
| zoomlion | 1 | 0 | 0 | 0 |
| zhqu1148980644 | 1 | 0 | 0 | 0 |
| StefanoCretti | 1 | 0 | 0 | 0 |
| skelviper | 1 | 0 | 0 | 0 |
| github-actions[bot] | 1 | 1 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#115zqbake2025-11-21 12:02How to save plots in API?
- Issue comment#115hollierowlands2025-11-17 14:26How to save plots in API?
- Issue#115hollierowlands2025-11-14 10:35How to save plots in API?
- ReleaseNanguage2025-11-11 05:450.4.0
- Issue comment#113zqbake2025-10-17 09:30Change tabix index type from TBI to CSI, allow chromosome size > 512 Mb
- Issue comment#112Nanguage2025-10-15 16:37Maybe csi index is better?
- Issue#112zoomlion2025-10-15 08:02Maybe csi index is better?
- Issue#108rikrdo892025-03-02 08:43`TADCoverage bed` error when index is older than data file
- Issue comment#106Nanguage2025-02-23 06:34Broken deployment due to pytest-cov
- Issue#106StefanoCretti2025-02-22 17:13Broken deployment due to pytest-cov
- Issue comment#102jamesoccean12024-09-27 02:57Issues using parameters in CLI
- Issue comment#102Nanguage2024-09-27 02:28Issues using parameters in CLI
- Issue#102jamesoccean12024-09-27 02:11Issues using parameters in CLI
- Issue comment#100Nanguage2024-08-17 01:48how to plot different colors for bigwig files when y axis is less than 0
- Issue comment#100jiangshan5292024-08-16 16:31how to plot different colors for bigwig files when y axis is less than 0
- Issue comment#101mdozmorov2024-07-18 11:55Error in plotting .mcool file
- Issue#101zhqu11489806442024-07-18 00:19Error in plotting .mcool file
- Issue comment#101mdozmorov2024-07-16 19:33Error in plotting .mcool file
- Issue comment#100jiangshan5292024-06-12 01:01how to plot different colors for bigwig files when y axis is less than 0
- Issue comment#100Nanguage2024-06-11 01:07how to plot different colors for bigwig files when y axis is less than 0
- Issue comment#88wbszhu2024-04-21 21:03Strange behavior of bigwig visualization
- Issue#93Nanguage2024-04-21 20:48Heatmap for tracks
- Issue#90Nanguage2024-04-21 20:47Bug in GTF handling [patch offered]
- Issue#94Nanguage2024-04-21 20:46Genomic position track
- Issue#95Nanguage2024-04-21 20:45Some error when plot GTF
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 29 stars here means stars gained during the window, not the repo's star count.