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Estimation of Promoter Activity from RNA-Seq data

active 2023-09-072025-04-21 (UTC)

Partial coverage20,505 / 26,261 hourly files (78%) · 2 absent upstream · 5,753 failed, retryable2023-08-152026-08-13 (UTC)— sampled evenly across the window, so rankings and trends hold; absolute counts scale up.
Events
35
Pushes
0
Pull requests
0
Issues
8
Stars
14
Forks
2

Activity over time

Daily event counts in the loaded window

Line chart, 593 days from 2023-09-07 to 2025-04-21. Pushes: 0 total, peak 0 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 8 total, peak 2 in a day. Comments: 11 total, peak 5 in a day. Stars: 14 total, peak 2 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
houruiyan8004
jleechung4004
ShenTTT3002
jonathangoeke2001
kenasada1000
Tianle-Li1000

Recent activity

Latest issues, pull requests and releases

  • Issue#54kenasada2024-10-04 06:58
    mean read count data
  • Issue comment#53ShenTTT2024-08-13 06:19
    unable to create promotor annotation for a non-model organism
  • Issue#53ShenTTT2024-08-13 06:19
    unable to create promotor annotation for a non-model organism
  • Issue comment#53ShenTTT2024-08-07 02:23
    unable to create promotor annotation for a non-model organism
  • Issue#52Tianle-Li2024-03-15 02:14
    Does getAlternativePromoters function work properly?
  • Issue#48jonathangoeke2023-12-21 07:19
    Error in `[[<-`(`*tmp*`, name, value = new("SimpleIntegerList", elementType = "integer",
  • Issue comment#50houruiyan2023-11-27 02:07
    core dumped
  • Issue#50houruiyan2023-11-27 02:07
    core dumped
  • Issue#50houruiyan2023-11-26 02:37
    core dumped
  • Issue#49houruiyan2023-11-26 02:29
    What is the mean of names(genomeStyles()) ?
  • Issue comment#49houruiyan2023-11-26 02:29
    What is the mean of names(genomeStyles()) ?
  • Issue comment#48houruiyan2023-11-26 02:28
    Error in `[[<-`(`*tmp*`, name, value = new("SimpleIntegerList", elementType = "integer",
  • Issue comment#47jleechung2023-11-25 19:08
    plotPromoters function not available in latest version
  • Issue comment#45jleechung2023-11-25 19:05
    Error in EstimateSizeFactorsForMatrix: at least one zero
  • Issue comment#49jleechung2023-11-25 19:03
    What is the mean of names(genomeStyles()) ?
  • Issue comment#48jleechung2023-11-25 19:00
    Error in `[[<-`(`*tmp*`, name, value = new("SimpleIntegerList", elementType = "integer",
  • Issue#49houruiyan2023-11-25 07:57
    What is the mean of names(genomeStyles()) ?
  • Issue comment#48houruiyan2023-11-25 07:25
    Error in `[[<-`(`*tmp*`, name, value = new("SimpleIntegerList", elementType = "integer",
  • Issue comment#48jonathangoeke2023-09-14 01:37
    Error in `[[<-`(`*tmp*`, name, value = new("SimpleIntegerList", elementType = "integer",

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 14 stars here means stars gained during the window, not the repo's star count.