Cell level integrated analysis of tissue histology and spatial transcriptomics
Jupyter Notebook · active 2025-06-26 → 2026-04-17 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 296 days from 2025-06-26 to 2026-04-17. Pushes: 9 total, peak 4 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 6 total, peak 2 in a day. Comments: 11 total, peak 2 in a day. Stars: 16 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| biopzhang | 18 | 9 | 0 | 7 |
| DruncBread | 4 | 0 | 0 | 2 |
| JxM298 | 2 | 0 | 0 | 1 |
| Demond-dev | 1 | 0 | 0 | 0 |
| Roxie0002 | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue#10biopzhang2026-01-26 16:14Mjolnir accessing issue
- Issue comment#9biopzhang2025-11-11 04:31No source code available for Mjolnir?
- Issue comment#7biopzhang2025-09-19 17:15`NaN` in Thor output
- Issue#2biopzhang2025-09-16 17:230 obs in fineST.adata
- Issue comment#6Roxie00022025-09-12 07:57How to perform data preprocessing on 10X Xenium data and nanostring SMI data?
- Issue comment#6biopzhang2025-09-05 03:44How to perform data preprocessing on 10X Xenium data and nanostring SMI data?
- Issue comment#5biopzhang2025-09-03 19:35Thor on Visium HD data Demo example
- Issue comment#4biopzhang2025-08-29 20:50IndexError: single positional indexer is out-of-bounds
- Issue comment#4JxM2982025-08-29 03:34IndexError: single positional indexer is out-of-bounds
- Issue comment#2DruncBread2025-08-18 04:360 obs in fineST.adata
- Issue comment#4biopzhang2025-08-15 14:59IndexError: single positional indexer is out-of-bounds
- Issue#4JxM2982025-08-15 05:39IndexError: single positional indexer is out-of-bounds
- Issue comment#2biopzhang2025-08-14 20:540 obs in fineST.adata
- Issue#3Demond-dev2025-08-14 14:282 Micron Anndata Object
- Issue#2DruncBread2025-08-14 07:260 obs in fineST.adata
- Issue comment#1DruncBread2025-08-14 07:16AttributeError: 'fineST' object has no attribute 'model_path'
- Issue#1DruncBread2025-08-10 06:12AttributeError: 'fineST' object has no attribute 'model_path'
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 16 stars here means stars gained during the window, not the repo's star count.