Pipeline to infer tree sequences with different datasets
active 2023-10-24 → 2025-08-02 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 649 days from 2023-10-24 to 2025-08-02. Pushes: 1 total, peak 1 in a day. Pull requests: 2 total, peak 1 in a day. Issues: 7 total, peak 3 in a day. Comments: 19 total, peak 12 in a day. Stars: 3 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| janaobsteter | 25 | 1 | 2 | 14 |
| gregorgorjanc | 5 | 0 | 0 | 4 |
| gmafrafortuna | 2 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#40gregorgorjanc2023-12-21 06:20Add benchmarking to the rules
- Issue comment#40janaobsteter2023-12-14 11:04Add benchmarking to the rules
- Issue comment#43gregorgorjanc2023-11-17 22:34Move from samples file constructions to the new sgkit
- Issue#32gregorgorjanc2023-11-17 22:33Add DAG to the README.md
- Pull request#51janaobsteter2023-11-17 12:28
- Issue#49janaobsteter2023-11-17 12:23Some rules duplicate vcf files
- Issue#47janaobsteter2023-11-17 12:17How to handle project name?
- Issue comment#39janaobsteter2023-11-17 12:06Do we need a step to move non-bialellic SNPs from the VCF?
- Issue#46janaobsteter2023-11-10 06:58Upgrade the ancestral inference to be able to infer on per-chromosome basis
- Issue comment#39gregorgorjanc2023-11-09 07:19Do we need a step to move non-bialellic SNPs from the VCF?
- Issue comment#41gregorgorjanc2023-11-09 07:17How to handle chromosome names?
- Issue#41janaobsteter2023-11-09 07:07How to handle chromosome names?
- Issue#40janaobsteter2023-11-09 07:06Add benchmarking to the rules
- Issue#39janaobsteter2023-11-09 07:06Do we need a step to move non-bialellic SNPs from the VCF?
- Pull request#38janaobsteter2023-11-03 10:43
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 3 stars here means stars gained during the window, not the repo's star count.