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INCATools/biosample-analysis

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active 2023-09-052026-03-26 (UTC)

Complete coverage26,761 / 26,761 hourly files (100%) · 2 absent upstream2023-08-152026-09-03 (UTC)
Events
26
Pushes
0
Pull requests
1
Issues
19
Stars
0
Forks
0

Activity over time

Daily event counts in the loaded window

Line chart, 934 days from 2023-09-05 to 2026-03-26. Pushes: 0 total, peak 0 in a day. Pull requests: 1 total, peak 1 in a day. Issues: 19 total, peak 18 in a day. Comments: 1 total, peak 1 in a day. Stars: 0 total, peak 0 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
turbomam21011

Recent activity

Latest issues, pull requests and releases

  • Issue#64turbomam2026-03-26 15:00
    use consistent case for ontology names
  • Issue comment#31turbomam2026-03-26 15:00
    run NER/CR over all textual metadata fields
  • Pull request#41turbomam2024-02-13 02:13
  • Issue#49turbomam2024-02-13 02:12
    target/occurrences-%.tsv make recipe can't find tabs
  • Issue#55turbomam2024-02-13 02:11
    target/%MIxS_columns.tsv target contains no %
  • Issue#56turbomam2024-02-13 02:11
    can't make target/emp_studies.tsv: empty CSV key at downloads/emp_studies.csv line 1
  • Issue#57turbomam2024-02-13 02:11
    Perl modules required by Makefile recipes
  • Issue#60turbomam2024-02-13 02:11
    Where did these folders come from?
  • Issue#61turbomam2024-02-13 02:11
    rebuild harmonized_table with xquery & Bill's Perl pivot
  • Issue#62turbomam2024-02-13 02:10
    scoped_mapping_of_biosamples_mixs "value is trying to be set on a copy of a slice"
  • Issue#65turbomam2024-02-13 02:10
    Find some patterns of dubious mappings to discuss with SMEs
  • Issue#67turbomam2024-02-13 02:10
    scoped_mapping_of_biosamples_mixs check existing SSSOMs before OLS
  • Issue#71turbomam2024-02-13 02:10
    reorganize notebooks directory
  • Issue#68turbomam2024-02-13 02:09
    Include local ontology's labels in human review spreadsheet
  • Issue#69turbomam2024-02-13 02:09
    Have been inconsistent about joining and splitting on "|" vs "|||"
  • Issue#70turbomam2024-02-13 02:09
    Reconsider pasting of entrez link parts
  • Issue#73turbomam2024-02-13 02:09
    cleanup commit 441a5fab9fca307e09bdd351176736a85b6cc3b2
  • Issue#74turbomam2024-02-13 02:09
    revert Makefile recipes that weren't ready for master
  • Issue#76turbomam2024-02-13 02:09
    Minimal accounting of SQLite vs XQuery columns
  • Issue#58turbomam2024-02-13 02:08
    make harmonized_table.db: no sars_cov_2_diag_pcr_ct_value_2 column
  • Issue#42turbomam2024-02-13 02:08
    add make command to sync biosample files

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.