A computational toolkit in R for the integration, exploration, and analysis of high-dimensional single-cell cytometry and imaging data.
active 2023-08-17 → 2026-01-21 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 889 days from 2023-08-17 to 2026-01-21. Pushes: 195 total, peak 22 in a day. Pull requests: 11 total, peak 2 in a day. Issues: 51 total, peak 8 in a day. Comments: 111 total, peak 7 in a day. Stars: 15 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| tomashhurst | 135 | 80 | 7 | 34 |
| ghar1821 | 132 | 91 | 4 | 23 |
| Felixillion | 18 | 18 | 0 | 0 |
| denvercal1234GitHub | 13 | 0 | 0 | 9 |
| SamGG | 10 | 0 | 0 | 10 |
| github-actions[bot] | 6 | 6 | 0 | 0 |
| betgou | 6 | 0 | 0 | 5 |
| AbbeyFigliomeni | 6 | 0 | 0 | 5 |
| RoryCostell | 6 | 0 | 0 | 4 |
| WilliamMWei | 5 | 0 | 0 | 3 |
| hrj21 | 4 | 0 | 0 | 3 |
| markmelzer | 4 | 0 | 0 | 2 |
| bakedjps | 3 | 0 | 0 | 3 |
| mortadelo93 | 3 | 0 | 0 | 2 |
| hannbann19 | 3 | 0 | 0 | 2 |
| immuen | 2 | 0 | 0 | 0 |
| phuongtran807 | 2 | 0 | 0 | 2 |
| mariecrane | 2 | 0 | 0 | 1 |
| earbebarnes | 2 | 0 | 0 | 1 |
| chintanparekh2301 | 2 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue#202ghar18212025-09-18 03:51Add labels for fast.multi.plot UMAP
- Issue#162ghar18212025-09-18 03:50Use here package to replace setwd in all functions
- Issue#197ghar18212025-09-18 03:50how to repel labels in make.colour.plot and make sure its not cut off
- Issue comment#204tomashhurst2025-09-18 01:54Cytonorm doesn't work when specifying different cellular and clustering parameters
- Issue#197ghar18212025-09-13 11:03how to repel labels in make.colour.plot and make sure its not cut off
- Issue#162ghar18212025-09-13 11:03Use here package to replace setwd in all functions
- Issue#202ghar18212025-09-13 11:03Add labels for fast.multi.plot UMAP
- Issue#186ghar18212025-09-13 11:02Unable to download and install development version
- Issue#202ghar18212025-09-13 11:00Add labels for fast.multi.plot UMAP
- Issue#116ghar18212025-09-13 10:31Centroid label missing if the x and y range is < 1
- Issue#162ghar18212025-09-13 10:29Use here package to replace setwd in all functions
- Issue#197ghar18212025-09-13 10:29how to repel labels in make.colour.plot and make sure its not cut off
- Issue comment#186ghar18212025-09-12 13:56Unable to download and install development version
- Issue comment#199ghar18212025-09-08 09:48FlowSOM error: Error in vector(mode = "list", maxK) : vector size cannot be NA/NaN
- Issue comment#207denvercal1234GitHub2025-05-17 10:46Inputs about transformation in CyTOF (squeezed at 0 axises)
- Issue#207denvercal1234GitHub2025-05-17 10:46Inputs about transformation in CyTOF (squeezed at 0 axises)
- Issue comment#207SamGG2025-05-16 16:08Inputs about transformation in CyTOF (squeezed at 0 axises)
- Issue comment#207denvercal1234GitHub2025-05-16 15:27Inputs about transformation in CyTOF (squeezed at 0 axises)
- Issue comment#207SamGG2025-05-16 14:55Inputs about transformation in CyTOF (squeezed at 0 axises)
- Issue#207denvercal1234GitHub2025-05-16 13:56Inputs about transformation in CyTOF (squeezed at 0 axises)
- Issue comment#206betgou2025-05-09 08:33Link expired
- Issue comment#206betgou2025-05-09 08:33Link expired
- Issue comment#206betgou2025-05-09 08:33Link expired
- Issue comment#206tomashhurst2025-05-09 08:30Link expired
- Issue comment#206betgou2025-05-07 07:59Link expired
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 15 stars here means stars gained during the window, not the repo's star count.