A fast and resource-efficient genome graph genotyping tool
active 2024-09-20 → 2026-02-26 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 525 days from 2024-09-20 to 2026-02-26. Pushes: 14 total, peak 9 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 14 total, peak 2 in a day. Comments: 20 total, peak 3 in a day. Stars: 27 total, peak 8 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| duzezhen | 31 | 13 | 0 | 13 |
| xibeixingchen | 6 | 0 | 0 | 3 |
| zhixue | 4 | 0 | 0 | 0 |
| wen-biao | 1 | 1 | 0 | 0 |
| kmosi0 | 1 | 0 | 0 | 1 |
| Yunxiao-web | 1 | 0 | 0 | 1 |
| ErickTong | 1 | 0 | 0 | 0 |
| Christina-145 | 1 | 0 | 0 | 0 |
| liuqihonggggggg | 1 | 0 | 0 | 1 |
| vsbonthala | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue#18duzezhen2026-01-20 22:37How should the --vcf-ploidy parameter be set when a pangenome contains a mixture of diploid, triploid, and tetraploid samples?
- Issue#15duzezhen2026-01-20 22:36Regarding Input VCF Generated from PGGB
- Issue comment#17duzezhen2026-01-03 02:09咨询动物或人类是否比pangenie更加优秀？
- Issue comment#15vsbonthala2025-12-16 18:00Regarding Input VCF Generated from PGGB
- Issue#10duzezhen2025-12-16 16:44Warning: The number of haplotypes at 12(21,690,260) is less than the specified parameter. Filling the deficit with zeros.
- Issue#16Christina-1452025-12-15 08:15Evaluate the results of Varigraph using third-generation sequencing data SV detection results
- Issue comment#15duzezhen2025-12-08 16:24Regarding Input VCF Generated from PGGB
- Issue comment#13Yunxiao-web2025-11-21 17:03Question Regarding Input VCF Generated from Minigraph-Cactus
- Issue comment#10duzezhen2025-10-19 21:57Warning: The number of haplotypes at 12(21,690,260) is less than the specified parameter. Filling the deficit with zeros.
- Issue comment#10kmosi02025-10-18 02:11Warning: The number of haplotypes at 12(21,690,260) is less than the specified parameter. Filling the deficit with zeros.
- Issue comment#10duzezhen2025-10-15 15:24Warning: The number of haplotypes at 12(21,690,260) is less than the specified parameter. Filling the deficit with zeros.
- Issue#8duzezhen2025-10-03 15:47VCF Merging after Individual varigraph Genotyping
- Issue comment#9duzezhen2025-10-02 20:55泛基因图谱构建
- Issue#9xibeixingchen2025-10-01 15:19泛基因图谱构建
- Issue comment#8duzezhen2025-10-01 00:12VCF Merging after Individual varigraph Genotyping
- Issue comment#7duzezhen2025-10-01 00:09最后得到的结果似乎分型失败了
- Issue comment#7duzezhen2025-09-28 15:59最后得到的结果似乎分型失败了
- Issue comment#7liuqihonggggggg2025-09-28 01:19最后得到的结果似乎分型失败了
- Issue comment#7duzezhen2025-09-24 14:34最后得到的结果似乎分型失败了
- Issue#6zhixue2025-09-24 03:19Can current version of varigraph distinguish genotype of 0/0 and ./.?
- Issue#6zhixue2025-09-23 06:36Can current version of varigraph distinguish genotype of 0/0 and ./.?
- Issue#5zhixue2025-09-23 05:52terminate called after throwing an instance of 'std::runtime_error'
- Issue#5zhixue2025-09-22 09:38terminate called after throwing an instance of 'std::runtime_error'
- Issue comment#4duzezhen2025-09-16 02:50同源四倍体图谱vcf构建的拆分问题
- Issue comment#4xibeixingchen2025-09-10 14:43同源四倍体图谱vcf构建的拆分问题
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 27 stars here means stars gained during the window, not the repo's star count.