A novel genome assembly pipeline based on deep learning
active 2023-08-28 → 2026-02-24 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 912 days from 2023-08-28 to 2026-02-24. Pushes: 54 total, peak 5 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 120 total, peak 8 in a day. Comments: 221 total, peak 12 in a day. Stars: 67 total, peak 6 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| Jwindler | 234 | 54 | 0 | 131 |
| gargkritika | 13 | 0 | 0 | 8 |
| lstxmu | 11 | 0 | 0 | 6 |
| qingxi586 | 9 | 0 | 0 | 6 |
| George-Zhou02 | 8 | 0 | 0 | 4 |
| Biomedical-CYZ | 7 | 0 | 0 | 6 |
| mcariou | 6 | 0 | 0 | 5 |
| pdru | 6 | 0 | 0 | 5 |
| OceanLyu | 6 | 0 | 0 | 6 |
| ksenia-krasheninnikova | 5 | 0 | 0 | 4 |
| jin-d919 | 5 | 0 | 0 | 4 |
| kiratalreja3 | 5 | 0 | 0 | 3 |
| mushroomOK | 5 | 0 | 0 | 2 |
| laura-valencia | 5 | 0 | 0 | 2 |
| Liyong-Zhang | 4 | 0 | 0 | 3 |
| darkxin12 | 4 | 0 | 0 | 2 |
| hylu-coder | 4 | 0 | 0 | 2 |
| sunnycqcn | 4 | 0 | 0 | 2 |
| laijirong | 4 | 0 | 0 | 2 |
| txfc | 4 | 0 | 0 | 3 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#60Jwindler2026-02-24 04:42No improvement while scaffolding using onehic.py
- Issue#59Jwindler2025-11-17 02:25AutoHiC for Omni-C
- Issue#59HyeonseonPark2025-11-12 09:53AutoHiC for Omni-C
- Issue comment#57Jwindler2025-07-21 10:42Suggestions for HIC Visualization
- Issue#57Jwindler2025-07-21 10:42Suggestions for HIC Visualization
- Issue#57linyuiz2025-07-21 08:20Suggestions for HIC Visualization
- Issue comment#56renaschweizer2025-07-14 20:24conda install failure and singularity error bwa GLIBC is missing
- Issue comment#55Jwindler2025-06-26 01:09AutoHiC Adjustment Produces No Visible Changes in Heatmap
- Issue#55lichaiyue2025-06-25 14:34AutoHiC Adjustment Produces No Visible Changes in Heatmap
- Issue comment#54Jwindler2025-05-06 02:56Getting error 'Cannot invoke "String.equals(Object)" because "magicString" is null' in `3d-dna.log`
- Issue#54MatteoSchiavinato2025-04-29 13:45Getting error 'Cannot invoke "String.equals(Object)" because "magicString" is null' in `3d-dna.log`
- Issue comment#53Keevai092025-04-24 06:40The final chromosome assembly file generated has less number of sequences than expected
- Issue comment#53Jwindler2025-04-21 06:14The final chromosome assembly file generated has less number of sequences than expected
- Issue comment#53Keevai092025-04-21 05:17The final chromosome assembly file generated has less number of sequences than expected
- Issue comment#53Jwindler2025-04-18 00:41The final chromosome assembly file generated has less number of sequences than expected
- Issue#53Jwindler2025-04-18 00:41The final chromosome assembly file generated has less number of sequences than expected
- Issue#52darkxin122025-03-30 04:04Resuming Task with Existing Data After Checkpoint File Error in AutoHiC Pipeline
- Issue comment#52darkxin122025-03-25 08:32Resuming Task with Existing Data After Checkpoint File Error in AutoHiC Pipeline
- Issue comment#52Jwindler2025-03-25 07:59Resuming Task with Existing Data After Checkpoint File Error in AutoHiC Pipeline
- Issue comment#52darkxin122025-03-25 07:42Resuming Task with Existing Data After Checkpoint File Error in AutoHiC Pipeline
- Issue comment#52Jwindler2025-03-25 07:20Resuming Task with Existing Data After Checkpoint File Error in AutoHiC Pipeline
- Issue#52darkxin122025-03-25 05:44Resuming Task with Existing Data After Checkpoint File Error in AutoHiC Pipeline
- Issue comment#51laura-valencia2025-03-14 18:25Singularity setup issue. Dependency conflicts and ModuleNotFoundError: No module named 'mmdet'
- Issue#51laura-valencia2025-02-17 08:35Singularity setup issue. Dependency conflicts and ModuleNotFoundError: No module named 'mmdet'
- Issue comment#51laura-valencia2025-02-17 08:34Singularity setup issue. Dependency conflicts and ModuleNotFoundError: No module named 'mmdet'
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 67 stars here means stars gained during the window, not the repo's star count.