A NextFlow pipeline for processing, analyzing, and visualizing bulk TCR sequencing data.
active 2024-02-26 → 2026-08-12 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 899 days from 2024-02-26 to 2026-08-12. Pushes: 104 total, peak 23 in a day. Pull requests: 21 total, peak 4 in a day. Issues: 10 total, peak 3 in a day. Comments: 36 total, peak 5 in a day. Stars: 1 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| dombraccia | 67 | 58 | 8 | 1 |
| dltamayo | 47 | 25 | 7 | 7 |
| dimalvovs | 28 | 8 | 3 | 10 |
| Copilot | 20 | 2 | 0 | 13 |
| KevinMLanderos | 8 | 5 | 2 | 0 |
| hweej | 4 | 2 | 1 | 1 |
| zaidissa | 4 | 4 | 0 | 0 |
| github-actions[bot] | 4 | 0 | 0 | 4 |
Recent activity
Latest issues, pull requests and releases
- Pull request#79KevinMLanderos2026-04-26 19:04
- Issue comment#77github-actions[bot]2026-04-07 18:08Implement channel-based Quarto notebook reporting process
- Pull request#76dltamayo2026-03-27 18:28
- Issue#48dltamayo2026-02-06 18:09Phenotype-grouped pseudobulk
- Issue comment#48dltamayo2026-02-06 18:09Phenotype-grouped pseudobulk
- Pull request#73dltamayo2026-01-26 22:02
- Pull request#72dltamayo2026-01-23 16:08
- Issue#25dltamayo2026-01-07 20:59Container versioning
- Issue comment#63dltamayo2026-01-07 20:57Cleanup
- Issue#63dltamayo2026-01-07 20:57Cleanup
- Pull request#70dimalvovs2026-01-07 18:36
- Pull request#70dimalvovs2026-01-07 17:05
- Issue#69dltamayo2026-01-06 21:15Scaling OLGA and Gliph2 for Compare workflow
- Issue comment#68github-actions[bot]2025-12-29 16:38Address Nextflow linting, add param validation, reformatting
- Pull request#67dltamayo2025-12-17 21:25
- Pull request#60dltamayo2025-12-04 18:03
- Issue comment#65github-actions[bot]2025-11-19 23:57Add rpy2 version 3.6.4 to environment
- Pull request#65KevinMLanderos2025-11-19 23:54
- Issue#63dimalvovs2025-11-07 22:19Cleanup
- Issue comment#61github-actions[bot]2025-10-23 21:17Feature/add unit test scaffolding
- Pull request#61hweej2025-10-23 20:49
- Issue#1dltamayo2025-10-03 15:54Adding TCRDist3 Functionality to Pipeline
- Issue#20dltamayo2025-10-03 15:54Adding genes not in tcrdist3 library
- Pull request#59dltamayo2025-10-02 15:19
- Issue comment#43dltamayo2025-09-24 19:46Reformat column name handling
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 1 stars here means stars gained during the window, not the repo's star count.