A rigorous hypothesis test for organism presence/absence in a metagenome
active 2023-08-22 → 2026-04-29 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 982 days from 2023-08-22 to 2026-04-29. Pushes: 526 total, peak 21 in a day. Pull requests: 165 total, peak 7 in a day. Issues: 62 total, peak 15 in a day. Comments: 545 total, peak 30 in a day. Stars: 25 total, peak 4 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| dkoslicki | 285 | 77 | 37 | 69 |
| sonarcloud[bot] | 256 | 0 | 0 | 256 |
| chunyuma | 232 | 124 | 38 | 42 |
| mfl15 | 214 | 116 | 40 | 31 |
| mahmudhera | 71 | 40 | 14 | 8 |
| jsrdrgz | 60 | 48 | 8 | 3 |
| codecov[bot] | 54 | 0 | 0 | 54 |
| sonarqubecloud[bot] | 47 | 0 | 0 | 47 |
| mohsenht | 32 | 24 | 4 | 4 |
| akp6031 | 30 | 29 | 0 | 0 |
| bioinfwithjudith | 28 | 22 | 1 | 3 |
| Maximilian10 | 25 | 17 | 3 | 2 |
| stephwon | 20 | 14 | 6 | 0 |
| ShaopengLiu1 | 18 | 5 | 5 | 5 |
| github-advanced-security[bot] | 11 | 0 | 0 | 8 |
| mlupei | 9 | 5 | 1 | 1 |
| kvnthomas98 | 6 | 4 | 2 | 0 |
| druvus | 6 | 0 | 4 | 2 |
| rtraborn | 5 | 0 | 1 | 4 |
| OliverBryan | 3 | 0 | 0 | 2 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#141rtraborn2026-04-29 21:29Adding the sylph coverage model to yacht
- Issue comment#156sonarqubecloud[bot]2026-04-26 18:28Fix formatting in the summary section of paper.md
- Issue comment#153sonarqubecloud[bot]2026-04-26 01:46Fix grammar in MAG fishing description
- Issue comment#155codecov[bot]2026-04-26 00:37Fix formatting in the summary section of paper.md
- Pull request#155stephwon2026-04-26 00:27
- Issue comment#154sonarqubecloud[bot]2026-04-26 00:11Add LaTeX formatting for k-size in use case examples
- Pull request#153stephwon2026-04-26 00:08
- Issue comment#141rtraborn2026-04-10 17:02Adding the sylph coverage model to yacht
- Pull request#151stephwon2026-03-30 01:44
- Issue comment#148codecov[bot]2026-03-25 00:39Joss paper
- Issue comment#146sonarqubecloud[bot]2026-02-26 17:12Joss paper response to review
- Issue comment#141sonarqubecloud[bot]2026-01-15 21:33Adding the sylph coverage model to yacht
- Issue comment#141rtraborn2026-01-14 19:14Adding the sylph coverage model to yacht
- Issue comment#141sonarqubecloud[bot]2026-01-14 18:53Adding the sylph coverage model to yacht
- Issue comment#146sonarqubecloud[bot]2026-01-08 18:33Joss paper response to review
- Issue comment#146sonarqubecloud[bot]2026-01-08 07:57Joss paper response to review
- Issue comment#146sonarqubecloud[bot]2026-01-08 04:33Joss paper response to review
- Issue comment#146codecov[bot]2026-01-08 04:09Joss paper response to review
- Issue comment#146sonarqubecloud[bot]2026-01-08 03:30Joss paper response to review
- Issue comment#141rtraborn2026-01-02 22:02Adding the sylph coverage model to yacht
- Issue comment#141sonarqubecloud[bot]2025-12-30 03:56Adding the sylph coverage model to yacht
- Issue comment#145sonarqubecloud[bot]2025-12-29 19:15Added Custom Headers to fix User-Agent based rate limiting
- Pull request#143stephwon2025-12-22 19:56
- Issue comment#143sonarqubecloud[bot]2025-12-22 18:35Joss paper edit
- Issue comment#143sonarqubecloud[bot]2025-12-22 18:09Joss paper edit
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 25 stars here means stars gained during the window, not the repo's star count.