MAGIC (Markov Affinity-based Graph Imputation of Cells), is a method for imputing missing values restoring structure of large biological datasets.
active 2023-08-16 → 2026-01-31 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 900 days from 2023-08-16 to 2026-01-31. Pushes: 0 total, peak 0 in a day. Pull requests: 3 total, peak 2 in a day. Issues: 11 total, peak 2 in a day. Comments: 17 total, peak 3 in a day. Stars: 82 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| yaolutian | 4 | 0 | 0 | 2 |
| dbhaskar92 | 3 | 0 | 3 | 0 |
| xingzhongyu | 3 | 0 | 0 | 1 |
| sam-va | 2 | 0 | 0 | 0 |
| LiuCanidk | 2 | 0 | 0 | 2 |
| TeodoraTockovska | 2 | 0 | 0 | 2 |
| elizabethmcmillan | 1 | 0 | 0 | 0 |
| jpmcga | 1 | 0 | 0 | 1 |
| Alistair-Turcan | 1 | 0 | 0 | 0 |
| Jiangmeling | 1 | 0 | 0 | 1 |
| wangqiwei313 | 1 | 0 | 0 | 1 |
| leonardfei | 1 | 0 | 0 | 1 |
| Chloe-HJL | 1 | 0 | 0 | 0 |
| SuperSe7enF | 1 | 0 | 0 | 1 |
| FerrenaAlexander | 1 | 0 | 0 | 1 |
| zvittorio | 1 | 0 | 0 | 0 |
| saeedfc | 1 | 0 | 0 | 1 |
| LenisLin | 1 | 0 | 0 | 1 |
| shihsama | 1 | 0 | 0 | 1 |
| iichelhadi | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#212jpmcga2025-03-10 17:52Does it really run in parallel?
- Issue comment#229xingzhongyu2025-02-27 01:09Differential expression of the archetypes in eig(M) is too slow
- Issue#228xingzhongyu2025-02-26 01:11Questions about the "Differential expression of the archetypes" section of the magic paper
- Issue#228xingzhongyu2025-02-25 14:42Questions about the "Differential expression of the archetypes" section of the magic paper
- Issue comment#227leonardfei2024-12-04 07:00length = 3' in coercion to 'logical(1)
- Issue#227elizabethmcmillan2024-11-18 15:47length = 3' in coercion to 'logical(1)
- Pull request#226dbhaskar922024-10-03 21:58
- Pull request#226dbhaskar922024-10-03 21:51
- Issue comment#193LiuCanidk2024-09-18 09:29Using MAGIC with a combined dataset
- Issue comment#193saeedfc2024-09-18 09:25Using MAGIC with a combined dataset
- Issue comment#199LiuCanidk2024-09-18 06:23MAGIC and batches
- Pull request#225dbhaskar922024-08-21 03:23
- Issue comment#222LenisLin2024-06-21 02:10Rmagic
- Issue comment#222Jiangmeling2024-05-10 03:44Rmagic
- Issue comment#219shihsama2024-04-15 09:07can not put in more than 1 genes.
- Issue#224zvittorio2024-04-04 13:20Is it possible to pass a custom embedding?
- Issue#223iichelhadi2024-03-20 07:13Is it a good idea to run magic on sctransform processed data?
- Issue#222Chloe-HJL2024-03-14 16:07Rmagic
- Issue#221Alistair-Turcan2024-03-10 00:01Option for Computing KNN with some genes, but returning whole graph
- Issue comment#215FerrenaAlexander2024-02-27 01:55Rmagic was removed from the CRAN repository
- Issue comment#219yaolutian2023-12-09 12:43can not put in more than 1 genes.
- Issue#219yaolutian2023-12-09 12:43can not put in more than 1 genes.
- Issue comment#219yaolutian2023-12-09 11:36can not put in more than 1 genes.
- Issue comment#219ZheyouCai2023-12-09 11:27can not put in more than 1 genes.
- Issue#220sam-va2023-11-14 02:33Getting 0.0 after imputation
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 82 stars here means stars gained during the window, not the repo's star count.