Autometa: Automated Extraction of Genomes from Shotgun Metagenomes
active 2023-08-15 → 2026-01-28 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 898 days from 2023-08-15 to 2026-01-28. Pushes: 43 total, peak 11 in a day. Pull requests: 27 total, peak 12 in a day. Issues: 13 total, peak 7 in a day. Comments: 39 total, peak 10 in a day. Stars: 11 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| WiscEvan | 50 | 17 | 14 | 8 |
| chasemc | 34 | 12 | 4 | 13 |
| Sidduppal | 34 | 14 | 9 | 5 |
| imonteroo | 3 | 0 | 0 | 3 |
| jason-c-kwan | 3 | 0 | 0 | 3 |
| codecov[bot] | 3 | 0 | 0 | 3 |
| hyphaltip | 2 | 0 | 0 | 0 |
| bindiyabajracharya | 2 | 0 | 0 | 2 |
| samche42 | 1 | 0 | 0 | 1 |
| bheimbu | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#370chasemc2025-01-17 20:19Update to nf-core last v2 version; incorporating GTDB
- Issue comment#370jason-c-kwan2025-01-06 23:03Update to nf-core last v2 version; incorporating GTDB
- Issue comment#370jason-c-kwan2024-12-24 15:57Update to nf-core last v2 version; incorporating GTDB
- Issue comment#370chasemc2024-12-23 22:24Update to nf-core last v2 version; incorporating GTDB
- Issue comment#370chasemc2024-12-23 22:23Update to nf-core last v2 version; incorporating GTDB
- Issue comment#370chasemc2024-12-17 00:17Update to nf-core last v2 version; incorporating GTDB
- Issue comment#370chasemc2024-12-17 00:12Update to nf-core last v2 version; incorporating GTDB
- Pull request#370chasemc2024-12-17 00:06
- Issue comment#366jason-c-kwan2024-12-08 19:27Update GTDB download and formatting
- Issue comment#366chasemc2024-12-08 17:36Update GTDB download and formatting
- Pull request#364chasemc2024-10-16 18:05
- Pull request#364chasemc2024-10-16 18:04
- Issue comment#363bindiyabajracharya2024-06-21 11:06Error in AUTOMETA:TAXON_ASSIGNMENT:LCA:PREP_DBS
- Issue comment#363bindiyabajracharya2024-06-19 05:16Error in AUTOMETA:TAXON_ASSIGNMENT:LCA:PREP_DBS
- ReleaseSidduppal2024-06-14 18:09Release 2.2.3
- Issue comment#349Sidduppal2024-06-14 18:06NA ambiguous in recursive_dbscan
- Issue#349Sidduppal2024-06-14 18:06NA ambiguous in recursive_dbscan
- Pull request#361Sidduppal2024-06-14 17:57
- Pull request#356Sidduppal2024-06-14 17:39
- Issue comment#361chasemc2024-06-14 17:22Fix NA issues after Pandas update
- Pull request#362chasemc2024-06-14 17:20
- Issue comment#349chasemc2024-06-11 21:12NA ambiguous in recursive_dbscan
- Issue comment#347imonteroo2024-06-11 06:54ncbi rsync error when downloading markers
- Issue comment#349imonteroo2024-06-11 06:36NA ambiguous in recursive_dbscan
- Issue comment#361chasemc2024-06-10 23:13Fix NA issues after Pandas update
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 11 stars here means stars gained during the window, not the repo's star count.