A genome-wide IM blockwise likelihood estimation toolkit
active 2023-08-23 → 2025-06-10 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 658 days from 2023-08-23 to 2025-06-10. Pushes: 5 total, peak 2 in a day. Pull requests: 9 total, peak 5 in a day. Issues: 12 total, peak 3 in a day. Comments: 20 total, peak 4 in a day. Stars: 3 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| GertjanBisschop | 15 | 1 | 5 | 8 |
| DRL | 13 | 2 | 2 | 5 |
| KLohse | 5 | 2 | 2 | 1 |
| juanitagutierrez | 5 | 0 | 0 | 3 |
| kuangzhuoran | 3 | 0 | 0 | 0 |
| hrluo93 | 2 | 0 | 0 | 1 |
| ala98412 | 1 | 0 | 0 | 0 |
| XieHongX | 1 | 0 | 0 | 1 |
| pierrebarry | 1 | 0 | 0 | 0 |
| MengLu-flw | 1 | 0 | 0 | 0 |
| A-J-F-Mackintosh | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#147GertjanBisschop2025-06-10 10:10What filtering steps are required for the VCF file input to gimbleprep?
- Issue comment#146GertjanBisschop2025-06-10 10:10How to estimate the gene flow betweem sister species using gIMble?
- Issue#147kuangzhuoran2025-06-08 16:25What filtering steps are required for the VCF file input to gimbleprep?
- Issue#146kuangzhuoran2025-06-07 17:00How to estimate the gene flow betweem sister species using gIMble?
- Issue comment#144A-J-F-Mackintosh2024-11-10 20:20Defining kmax and problems with gIMble optimize
- Issue#143kuangzhuoran2024-06-07 06:45after running gimble parse, gimble.vcf.gz is null
- Issue#138ala984122024-05-01 07:09Not enough blocks in Gimble datastore.
- Issue comment#131XieHongX2024-02-09 11:09too much memory needed during gimble windows
- Issue comment#114GertjanBisschop2023-12-14 20:28gimble makegrid usage
- Issue comment#114juanitagutierrez2023-12-14 19:24gimble makegrid usage
- Issue#122MengLu-flw2023-12-08 17:30How to interpret the number of anomaly counts?
- Issue comment#114juanitagutierrez2023-12-01 20:19gimble makegrid usage
- Issue comment#117KLohse2023-11-08 11:13Simulating individual blocks is prohibitively slow
- Issue comment#115GertjanBisschop2023-11-05 21:42Removal of parallelisation in makegrid and optimize
- Issue comment#115GertjanBisschop2023-11-05 21:40Removal of parallelisation in makegrid and optimize
- Issue comment#116hrluo932023-11-05 13:36gimbleprep reprocess.py, line 71 NameError: name 'lib' is not defined
- Issue#116hrluo932023-11-05 08:07gimbleprep reprocess.py, line 71 NameError: name 'lib' is not defined
- Issue#101DRL2023-10-13 10:27Problem with llvmlite while running gimble parse
- Issue comment#101DRL2023-10-13 10:27Problem with llvmlite while running gimble parse
- Issue#99DRL2023-10-13 10:27Missing dependencies when Running 'gimble parse'
- Issue comment#99DRL2023-10-13 10:27Missing dependencies when Running 'gimble parse'
- Issue comment#114DRL2023-10-13 10:25gimble makegrid usage
- Issue comment#114GertjanBisschop2023-10-13 08:47gimble makegrid usage
- Issue#114juanitagutierrez2023-10-13 02:16gimble makegrid usage
- Pull request#109KLohse2023-09-10 10:31
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 3 stars here means stars gained during the window, not the repo's star count.