A package to run real time analysis of nanopore methylation data.
active 2024-09-24 → 2026-08-11 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 687 days from 2024-09-24 to 2026-08-11. Pushes: 171 total, peak 11 in a day. Pull requests: 59 total, peak 8 in a day. Issues: 20 total, peak 2 in a day. Comments: 51 total, peak 8 in a day. Stars: 8 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| mattloose | 247 | 152 | 58 | 25 |
| adbeggs | 8 | 0 | 0 | 6 |
| calocascio | 7 | 0 | 0 | 7 |
| github-actions[bot] | 7 | 7 | 0 | 0 |
| sofievo | 4 | 0 | 0 | 4 |
| Copilot | 3 | 0 | 0 | 1 |
| handoko12u | 3 | 0 | 0 | 3 |
| ziphra | 2 | 0 | 0 | 0 |
| oristaszewski | 2 | 0 | 0 | 0 |
| AunErki | 1 | 0 | 0 | 0 |
| jasteen | 1 | 0 | 0 | 0 |
| jbreyes5 | 1 | 0 | 0 | 1 |
| rgregs | 1 | 0 | 0 | 1 |
| lucy924 | 1 | 0 | 0 | 1 |
| ggrimes | 1 | 0 | 0 | 0 |
| 77415 | 1 | 0 | 0 | 1 |
| senzhaocode | 1 | 0 | 0 | 0 |
| samuelmontgomery | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue#147AunErki2026-05-04 08:51Target.bam missing and variant detection not was not run
- Pull request#145mattloose2026-04-04 11:42
- Pull request#144mattloose2026-04-04 09:49
- Pull request#144mattloose2026-04-04 09:49
- Issue comment#137774152025-11-11 05:58[GENERAL] <lfs pull issue>
- Issue#140jasteen2025-10-24 01:41[GENERAL] Wrong version of hv_rapidCNS2/bin/methylation_classification_nanodx_v0.2.R
- Issue comment#138mattloose2025-10-17 13:15[QUESTION] Global coverage calculation
- Issue comment#138mattloose2025-10-17 12:51[QUESTION] Global coverage calculation
- Issue#139ziphra2025-10-17 12:47[QUESTION] target panel vs adaptive sampling bed
- Issue#139ziphra2025-10-17 12:47[QUESTION] target panel vs adaptive sampling bed
- Issue#135senzhaocode2025-09-22 06:41[GENERAL] Error in process_sample_file: 'NoneType' object is not iterable
- Issue comment#118jbreyes52025-08-30 05:29[BUG]LFS budget execeeded
- Issue comment#131adbeggs2025-08-05 10:09[BUG] Importerror
- Issue comment#131mattloose2025-08-04 12:54[BUG] Importerror
- Issue comment#118mattloose2025-07-31 10:50[BUG]LFS budget execeeded
- Issue comment#118calocascio2025-07-31 06:07[BUG]LFS budget execeeded
- Issue comment#118mattloose2025-07-28 12:11[BUG]LFS budget execeeded
- Issue comment#118calocascio2025-07-28 12:09[BUG]LFS budget execeeded
- Pull request#130mattloose2025-07-21 09:35
- Issue#129mattloose2025-07-15 15:34[BUG] ERROR - 'NoneType' object has no attribute 'get'
- Issue comment#129mattloose2025-07-15 15:30[BUG] ERROR - 'NoneType' object has no attribute 'get'
- Issue comment#129mattloose2025-07-15 15:25[BUG] ERROR - 'NoneType' object has no attribute 'get'
- Issue comment#97mattloose2025-07-15 13:03[QUESTION] BAM input error from Minknow - "st" Tag
- Issue comment#97sofievo2025-07-15 13:01[QUESTION] BAM input error from Minknow - "st" Tag
- Issue comment#122lucy9242025-07-15 04:20[BUG] create conda environment with robin.yml
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 8 stars here means stars gained during the window, not the repo's star count.