Transformers for Clinical NLP
active 2023-08-15 → 2026-04-17 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 977 days from 2023-08-15 to 2026-04-17. Pushes: 96 total, peak 7 in a day. Pull requests: 76 total, peak 11 in a day. Issues: 44 total, peak 10 in a day. Comments: 70 total, peak 8 in a day. Stars: 5 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| tmills | 172 | 62 | 45 | 24 |
| etgld | 36 | 0 | 1 | 21 |
| ianbulovic | 30 | 3 | 13 | 9 |
| spencerthomas1722 | 25 | 18 | 4 | 2 |
| mikix | 12 | 2 | 3 | 5 |
| angus-lherrou | 11 | 3 | 5 | 2 |
| wonjininfo | 11 | 5 | 3 | 2 |
| dogversioning | 3 | 0 | 0 | 1 |
| guo0O0o | 2 | 0 | 1 | 0 |
| ghdinh | 2 | 2 | 0 | 0 |
| bohJiang12 | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#243ianbulovic2026-03-11 19:22
- Issue#83ianbulovic2026-03-06 21:50Generalized function for mapping from token offsets to character offsets in temporal rest api
- Issue comment#155ianbulovic2026-03-06 21:43how to configure tokenization for inference time with rest api
- Issue comment#239ianbulovic2025-08-29 18:50Consolidate REST APIs
- Pull request#239ianbulovic2025-08-29 18:50
- Issue#238ianbulovic2025-08-06 16:53`build-and-test` CI job occasionally fails with HTTP 429
- Pull request#240ianbulovic2025-08-06 16:42
- Issue comment#236ianbulovic2025-08-01 16:48Enable --resume_from_checkpoint and warn if model has different cnlpt version
- Pull request#239ianbulovic2025-07-30 19:40
- Issue#237ianbulovic2025-07-21 20:14Rebuild documentation
- Pull request#236ianbulovic2025-07-21 19:59
- Issue#235ianbulovic2025-07-21 17:34Load class weights for non-CNN models
- Issue#234ianbulovic2025-07-21 17:29Warn user when model was created with an older version of cnlpt
- Issue comment#96ianbulovic2025-07-21 17:21create model_selection_score cmd line parameter with a few common available options
- Issue comment#143ianbulovic2025-07-21 17:15rename ClinicalNLPDataset
- Issue#195ianbulovic2025-07-21 17:09Deprecated logger.warn() to be removed in Python 3.13
- Issue comment#229ianbulovic2025-07-21 17:09improve informativeness of evaluation results
- Issue comment#232ianbulovic2025-07-21 17:08Permission denied from accessing ChemProt website while fine-tuning sequence tagging model
- Issue#232ianbulovic2025-07-21 17:08Permission denied from accessing ChemProt website while fine-tuning sequence tagging model
- Issue comment#230ianbulovic2025-06-06 15:37Train system and QOL refactoring
- Issue#232bohJiang122025-06-03 15:44Permission denied from accessing ChemProt website while fine-tuning sequence tagging model
- Pull request#230ianbulovic2025-05-05 19:12
- Issue#225tmills2025-04-24 16:03Support ModernBERT
- Issue comment#227tmills2025-04-23 16:02Fix evaluation KeyError for "eval_one_score" and model loading issue for ModernBERT
- Pull request#227tmills2025-04-23 16:01
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 5 stars here means stars gained during the window, not the repo's star count.