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RNAGym is an extensive benchmark suite and resource for RNA fitness and structure prediction

Python · active 2024-08-282026-08-07 (UTC)

Partial coverage20,504 / 26,260 hourly files (78%) · 2 absent upstream · 5,753 failed, retryable2023-08-152026-08-13 (UTC)— sampled evenly across the window, so rankings and trends hold; absolute counts scale up.
Events
103
Pushes
45
Pull requests
3
Issues
9
Stars
24
Forks
2

Activity over time

Daily event counts in the loaded window

Line chart, 710 days from 2024-08-28 to 2026-08-07. Pushes: 45 total, peak 8 in a day. Pull requests: 3 total, peak 2 in a day. Issues: 9 total, peak 2 in a day. Comments: 7 total, peak 2 in a day. Stars: 24 total, peak 4 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
murfalo504033
rohitarorayyc5102
pascalnotin3300
YuanLi-X2001
xjtu-xsbsy2001
csheare1100
alex-hh1000
chaitjo1000

Recent activity

Latest issues, pull requests and releases

  • Issue comment#15YuanLi-X2026-01-07 01:09
    Being confused by the datastructure
  • Issue#15murfalo2026-01-06 20:34
    Being confused by the datastructure
  • Issue comment#15murfalo2026-01-06 20:34
    Being confused by the datastructure
  • Issue comment#14murfalo2026-01-06 20:27
    Secondary Structure Prediction with RibonanzaNet-SS?
  • Issue#15YuanLi-X2026-01-06 16:22
    Being confused by the datastructure
  • Issue#14chaitjo2025-12-24 01:25
    Secondary Structure Prediction with RibonanzaNet-SS?
  • Issue comment#12xjtu-xsbsy2025-12-11 23:47
    Failed to reproduce
  • Issue#12murfalo2025-12-11 22:41
    Failed to reproduce
  • Issue#12xjtu-xsbsy2025-12-10 02:08
    Failed to reproduce
  • Pull request#11murfalo2025-12-07 02:50
  • Releasemurfalo2025-11-16 05:00
    RNAGym preprint snapshot
  • Issue comment#9rohitarorayyc2025-11-09 05:27
    Missing fitness model predictions files
  • Issue comment#7murfalo2025-11-07 21:54
    HF data vs data here vs data in paper?
  • Issue#10murfalo2025-11-07 17:21
    Question re: secondary structure and fitness
  • Issue#10murfalo2025-11-07 16:03
    Question re: secondary structure and fitness
  • Issue#9alex-hh2025-10-30 13:34
    Missing fitness model predictions files
  • Issue comment#6rohitarorayyc2025-10-27 22:04
    Missing Labels in Soo_2021_ribozyme.csv File
  • Issue#6rohitarorayyc2025-10-27 21:55
    Missing Labels in Soo_2021_ribozyme.csv File
  • Pull request#5murfalo2025-05-18 21:47
  • Pull request#5murfalo2025-05-18 21:47

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 24 stars here means stars gained during the window, not the repo's star count.