Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.
active 2023-08-17 → 2026-02-09 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 908 days from 2023-08-17 to 2026-02-09. Pushes: 2 total, peak 1 in a day. Pull requests: 2 total, peak 1 in a day. Issues: 11 total, peak 2 in a day. Comments: 11 total, peak 3 in a day. Stars: 13 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| elakatos | 11 | 2 | 0 | 7 |
| h170607 | 4 | 0 | 0 | 1 |
| tucano | 3 | 0 | 1 | 1 |
| RTCarmo | 3 | 0 | 0 | 1 |
| biolxy | 1 | 0 | 1 | 0 |
| WuRAFY | 1 | 0 | 0 | 0 |
| qianyang8 | 1 | 0 | 0 | 0 |
| QianRongAn | 1 | 0 | 0 | 0 |
| fangfang0906 | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue#51qianyang82025-07-10 21:09unable to reproduce test run
- Issue comment#50RTCarmo2024-11-29 20:03Docker update
- Issue#50RTCarmo2024-11-29 19:56Docker update
- Pull request#46biolxy2024-02-06 05:49
- Issue comment#45elakatos2023-12-19 07:57AttributeError: 'Sample' object has no attribute 'appendedEpitopesIndels'
- Issue#45QianRongAn2023-11-21 04:21AttributeError: 'Sample' object has no attribute 'appendedEpitopesIndels'
- Issue comment#44h1706072023-11-10 07:36NeoRecoPo.py error
- Issue#44h1706072023-11-10 07:36NeoRecoPo.py error
- Issue#44h1706072023-11-09 02:53NeoRecoPo.py error
- Issue#43h1706072023-11-09 01:36Is there any parameter to set up multithreading?
- Issue#42WuRAFY2023-11-04 16:28Docker version
- Issue comment#41elakatos2023-10-06 15:29Conversion script for netMHCpan 4.1 output
- Issue#41tucano2023-10-06 15:01Conversion script for netMHCpan 4.1 output
- Issue#39elakatos2023-09-28 09:17BeoClass bug: in python 3 filter return an iterator.
- Issue comment#39elakatos2023-09-28 09:17BeoClass bug: in python 3 filter return an iterator.
- Pull request#40tucano2023-09-27 12:35
- Issue#38elakatos2023-09-22 09:56Output empty with test data
- Issue comment#38elakatos2023-09-22 09:56Output empty with test data
- Issue comment#38tucano2023-09-22 08:46Output empty with test data
- Issue comment#35elakatos2023-09-07 10:28NeoRecoPo.py IndexError
- Issue comment#37elakatos2023-09-07 08:54Indel not processing correctly
- Issue comment#36elakatos2023-09-07 08:36the origin of the Expression column in the output when not specifying RNA-seq data
- Issue#37RTCarmo2023-08-29 17:13Indel not processing correctly
- Issue comment#36fangfang09062023-08-17 18:45the origin of the Expression column in the output when not specifying RNA-seq data
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 13 stars here means stars gained during the window, not the repo's star count.