This is a Nextflow pipeline for generating sequencing reports for the SNP&Seq Technology platform, NGI Uppsala, SciLifelab Genomics.
active 2023-12-12 → 2026-04-13 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 854 days from 2023-12-12 to 2026-04-13. Pushes: 14 total, peak 3 in a day. Pull requests: 30 total, peak 4 in a day. Issues: 0 total, peak 0 in a day. Comments: 44 total, peak 6 in a day. Stars: 2 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| matrulda | 70 | 8 | 18 | 23 |
| nkongenelly | 28 | 5 | 9 | 7 |
| Aratz | 26 | 1 | 1 | 9 |
| monikaBrandt | 10 | 0 | 1 | 5 |
| kjellinjonas | 1 | 0 | 1 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#69matrulda2026-02-12 06:27
- Pull request#70nkongenelly2026-02-12 06:08
- Pull request#69matrulda2026-02-12 05:58
- Issue comment#68nkongenelly2026-01-21 08:48Adapt for Nextflow 25.10.2
- Issue comment#68matrulda2026-01-21 08:45Adapt for Nextflow 25.10.2
- Issue comment#67matrulda2025-11-21 14:49Add BCLConvert support
- Issue comment#67matrulda2025-11-13 09:09Add BCLConvert support
- Issue comment#67matrulda2025-11-11 16:42Add BCLConvert support
- Pull request#67nkongenelly2025-10-29 14:56
- Pull request#66matrulda2025-05-09 11:52
- Issue comment#66nkongenelly2025-03-27 12:12Fetch read length info for run instead of just lane 1
- Pull request#66kjellinjonas2025-03-17 14:25
- Pull request#65matrulda2025-01-30 07:45
- Pull request#65matrulda2025-01-29 14:38
- Pull request#64matrulda2024-09-30 13:52
- Pull request#64matrulda2024-09-30 13:44
- Pull request#63matrulda2024-09-17 12:18
- Pull request#63matrulda2024-09-16 13:38
- Pull request#62matrulda2024-09-03 08:53
- Issue comment#62matrulda2024-09-03 08:52Increase resouces for FastQC and fastq screen
- Issue comment#62matrulda2024-09-03 08:07Increase resouces for FastQC and fastq screen
- Pull request#62matrulda2024-09-03 08:02
- Pull request#61matrulda2024-08-22 10:50
- Issue comment#61matrulda2024-07-01 13:53DATAOPS-750: Persisting tables in seqreports General Statistics when …
- Pull request#60matrulda2024-06-28 06:03
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 2 stars here means stars gained during the window, not the repo's star count.